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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22435_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		tudor_staphylococcus/micrococcal_nuclease_[Bombyx_mori]
Ontology
GO:0001649 P osteoblast differentiation
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016020 C membrane
GO:0016442 C RISC complex
GO:0031047 P gene silencing by RNA
GO:0042470 C melanosome
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097433 C dense body
Transcript
Level		FPKM:6.16 TPM:2.75
ORF EntryO_BomaMSG12161_complete:A_BomaMSG_c22435_g1_i2
Sequence
(Nucleotide)
ATATAAGTGAAGTTAAAATACATATGAATTGCAATTACAAAATGTGGCTACAATTTACCA
CTTGAATTGAAATGAGAAGTACATTACAAGTAAAAATATAAAAAGGCAAACAAATAAAAA
GCAGAAAAATATTGAAAACTGACTTAAATTCATGCTTCTATTTATAAGAATCTCAGAACT
GCTGAATTGAAACACAATTTCCGGTTTTGGCAGGAACCGTATAATATCTAAGTGACTGTA
AAAGTCGCCGTAGAGCTATGAAAACTCAACAAAACGAAGCAGAAAAATCTAGATCACGGA
TTTTTTTCGCTTATGCAGGATTGTCTTTTGAGCGTTGATATGTACTGAGTATACGTTTTT
AATCCACATATGACAAATTTATAAAAGATTGATGTGAATACGTATGATGATATGTATGAC
CGCTTCAACCTAATCAAGAAGATTAATGTGCTTTAACCTAATTCGGGAATATATTAAATG
AGTCTGATGCTTTTGATAGCGGGATAATTCAGAGTTAAGGTTGCCGCCTGAGACAGTTAA
TTCAAAATTTCGTGTAATATTATTTACGAGATTTGGGATGCAAGGTAAGAATCGAAAAAC
TCCGAAGGTGACACGTTCAAGAGGCTGGCTATTCCCTACCCTGCTTAAATTATCTAATAA
GTTTTTATGGTCGGTAAGTTTATATTATTTTGGTTTTCTTTTTTTTATTCAAGATTTTTT
AGAATATTGGGATGCTGTTTAAAGAAAATTAAATATTTAGTGCAAAATGTTTTGCTTCTG
CGACCCATTCCCGACCGGCGATTTGACGAAATGTTATGTTTTCAGCAAATATTATAAGAG
AAAAATATTCATTAACAGTGACACAGAAACGAAGGATGAACCATTTGCGTGGGAAGCCCG
TGAATTCCTAAGGAAGAAGCTAGTCGGCAAGGAGGTTATCTTCACTGCTGAGAAACCGGC
GAATTCAGCGAATAGAGAATATGGCGTCGTATGGGCTGGCAAAAATCCTTCCAAAGATGA
AAATGTTACTGAAGCCTTGCTGGCTGAAGGTCTCGTTAAAGTTCGAGAAGGTGCTAGAAA
TATACCTCAGCTCAAAAAGCTGGTAGAGATCGAAGAGACAGCCAAATCGCAAGGCAAAGG
AATTTGGAGTACTGATGCTGATAAACATGTACGAGACATCAAGTGGTCTATCGAAAATCT
GAAAGCTTTCGTCAACAAATACAATGGTAAGCCTGTAAAGGCTATCATTGAATATGTGCG
TGATGGTTCTACAGTACGTCTTTGTTTGTTACCTGAATACACTCCCATTACACTGATGCT
ATCTGGAATTCGTTGTCCTGCTGTAAGACAAGACGGTGAATCTGAGCCTTACGCAGAAGA
AGCCCGCTTCTTCCTGGAGTCCAGATTGCTGCAGAAAGACGTCGAAGTAGTTCTGGAGTC
CGTTAATAACAACAATATCGTGGGCACGATACTGCACCCGCAGGGTAACATCGCTGAGGC
CCTACTAAGACAAGGATTCGCGAAATGTGTAGACTGGTCGTTAGCTGTTATGAAATCAGG
TGCGTCTACATTGAGAGCCGCCGAAAGTGCAGCTAAGGAAGCAAAACTGCGCATATGGAT
AAATTATGTAAGCAATGCACCTATAATCCCGGCGAAAGACAAGGAATTCACGGCCACCGT
GTTGGAAGTAGTCAACGGAGACGCGCTCGTTGTTAAAACACATAGCAATGTACAGAAAAA
AATATTCTTAGCTAGCGTCAGGCCTCCTCGTGAAAAGAGCAATGCTGACGACGACAATAA
ACCTATACCGAGGCCAAAAGGATTTAGACCTTTGTATGATATTCCATGGATGTACGAGGC
ACGTGAATTTCTTAGAAAAAAACTGGTTGGGAAAAAAGTTAATGTGACAGTAGATTACAT
TCAGCCAGCAAAAGATAATTTCCCAGAAAAGACATGTTGTACTGTCGTAAGCGGTGGCAC
GAACATAGCTGAAGCTCTGGTGACTAAAGGGTTGGCAACAGTTGTGAAGTACAGAAACGA
TAATGACCAAAGAAGCTCACAGTATGATAAATTATTGGAGGCCGAATTGAAAGCAGTTAA
GGCCGCAGTTGGTATTCACAACAAGAAAGAAGTGCCCACCCACCGTGTGCAAGACACCAG
TGGAGATCCAACGAAAGCAAAAAAATTCTTCCCATTCCTCAAACGTGCCCAAAAAACCGA
GGCTACTGTGGAATTTGTTGCTAGCGGATCGCGTATGCGTTTATATATTCCTAAAGAATC
CGTCTTAGTAACCTTTTTGCTTGCCGGCATTAACTGTCCCCGAGGTGCGAGACCTGCAAT
TGGCGGAGGACCCAAACAAAATGCAGAGCCTTTCGGAGAAGAAGCTTTGCAGTTCACGAA
AGAAAAGTGCTTACAGCACGACGTCTTAGTCAGCATAGAAGAGATTGACAAAGCAGGGAA
CTTCATCGGTTGGCTCTGGGTTGACAACGAGAATATGTCCGTTTCGTTAGTCGAACATGG
CCTTGCCTCGGCGCATCACACGGCGGAAACGTCTGAGTTTGCACGCGCCATAAAAACCGC
TGAAGAGAATGCAATTAAAAAGCGTATCGGCGTATGGAAAGACTATGTCGAAGAAGAAAA
AGAAGTCGAAAAGGAGAGAAATGCAACTGTACAAGATCGTACTCTTAAATACGACCGCGT
GGTTATCACTGAAGTCACTCCTGAAGGTCATTTCTACGCACAAAATGTCGATTTAGGTGT
GAAACTAGAAAGTCTTATGGAAACTATACACACTGAGTTTAGAAACAGTCACCCATTGCC
TGGATCTTACGCTCCAAGGAAGGGAGCCATCTGTGCTGCTCGTTTTACAGCCGATGACCA
ATGGTACAGGGCAAAGATTGAAAAAATAACAGATAATAGGCAGGTCCAAGTTGTATACAT
CGACTATGGAAATCGAGAGACGTTAGACATAACCAGATTGGCAGCACTCCCGGTGGGTAC
TGAGCACGATTCGCCTTTTGCGACAGAGTATGTTCTCTGCTGTGTGAAATTCCCCTCGGA
CCCTGATGACCGAGCAGAAGCTGTAACCAGTTTCTATAATGATGTCGTTGGCAAGAGGCT
GCTCTTGAATGTAGAAATCCGTGGATCACCAGCTGCTGTTACCCTTGTTGATCCTAACAC
AAACATTGATCTGGGCAAGAACCTTATCAAAGATGGGCTCGTGTTAGTGGAGCAGGTTCG
TGACAGCCGACTGGCAACATTGATGGCCGAATATCGCGCCGCTCAGGAGCACGCCAAGAG
CTCGCGACTCAACTTGTGGCGGCACGGTGACATCACCGAGGACGATGCGGTGGAATTCGG
GGTGCGTCGCTAGCTGTACGCCCCCGGCGTTGACGCCACCACATCGCCCACGCACATCCG
CAACTGTGCCACCTGCACCACTGTAGATGTCGACAGCATCGTCCACGCCATTCTTTACCA
CATACTGTGAACTATAAACTGAACAATGAACTTTAAATCATGATGTAATTCAAACTTGGA
TGTTGTGAACAATTGTTTATTAATCAGAAGTTTATTATTGCTAATTACGATACGTGTGTT
GTGCCGGAGGACATTACGATGGTGAGCAGTGAACACGGCAGCGGAAGGGGTGCCGCAACA
CTTACACGCTAGCATACCGAGCATAATTCATAAAAACATATTTTTTAAATTTACAAACAT
ATTTTAGAAATTAAAACAGATTCATAACTATAATAGATTAAATAAATTATATAGGTCGCT
GATTTAAATACTTAATTACCTACAAAC
(3807 bp)

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