SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22434_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_C6orf106_homolog_isoform_X2_[Bombyx_mori]
Ontology
GO:0000407 C phagophore assembly site
GO:0005776 C autophagosome
GO:0016236 P macroautophagy
GO:0043130 F ubiquitin binding
Transcript
Level		FPKM:5.16 TPM:2.31
ORF EntryO_BomaMSG12156_complete:A_BomaMSG_c22434_g1_i3
Sequence
(Nucleotide)
CTGTGCAGAAATTCATTCTTCAGAAATAACAAAAGTCAGCTGACGTACATACGTAAACAA
AGGATATGTCATTATACCTGAAAGTTGTAAAATAATTATTTTACAAACAGTTAAATATTT
ATTTCTTATTTATTCATATATATAAAACGTCGTGAACTAAAATGGACGTTGATGGCGCCT
CAGTACCTGGAGAAATTGATCAAAATCTATTATTACAATTTAGTTGTATGAATACAACAG
ACAGAGAAGAACTTATTAAACAAATGCAGAAGCTTTTAGGACCTAGTCTGAATTATAATA
CAGCTAGTTTCTTCTTAGATATGAGTAACTGGAATTTACAAGCTGCTATATGTTGCTATT
TAGATTATACATCACCAAAGCTTCCTTCAATGTCAGTAAAAGCATCTGAAGGTCCAACTG
GTAGTTTGGAACCTGGTGCACGTTTTGATCAAAATTGGAGTATTGTCAACACGGGAACAG
AACAATGGCCAGGTTGTTGTAGATTAATACAAGCTGGAGGTGAACCTCTTGGCGCTACAC
CTGTTTATTTACCACCTCTTCCTGTTGGACATTCCACAACAGTTACATTAAAATTAGTAG
CCCCTTCAACTTCTGGAACCCATAAAAGCTTCTTTCATTTAGTTACAGATAAAGGCGAAC
AGATAGGTGATACACTTTGGGTTGAAGTCACAGTTGAATCTGAGATGACTATGGCACTTG
TCGAACAATTAGCAGCACTTCCAGTCCCTAGCAGTCGATTGGAAGAATTGCTTACACAGA
CACAATCACAAGACGATCAAATGTGTTGAAAGACTCTGGAAACTAGAAACATAACATTGT
AAAATTATCATTATCTAACAATAATAACAAATAATTTTTATCCAAATTTGCTTTATAGGT
TCTATTTACAATTTTTTGGATCTTAATTAGGTAGGTACTTAAATTGGCTAAGTATTGTAT
GTTACAATTTTAAAATTTATTTGGTAG
(987 bp)

- SilkBase 1999-2023 -