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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22431_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		geranylgeranyl_pyrophosphate_synthase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.19 TPM:1.87
ORF EntryO_BomaMSG12147_5prime_partial:A_BomaMSG_c22431_g1_i1
Sequence
(Nucleotide)
GAACGAAGCTAGCTTCCGCATTCAACTACTGGCTCAAGATATCTGAAGAGAAACTGAGAC
TAGTTGGTGATATTGTACAAATGCTACACAATGCCAGTTTATTGATCGACGACATTCAAG
ACAACAGCATCTTACGGCGCGGAATACCGGTAGCCCACTCCATCTATGGTGTCGCGAGCA
CCATCAACGCTGCGAACTATGCTATGATCATAGCCCTCGAGAAGACTTTGGAGCTTGGCC
ATCCATTGGCAACGACTGTGTACACCGAACAGCTGTTGGAACTGCATCGAGGTCAGGGCA
TGGAGATTTACTGGCGGGACAACTTCCAGTGTCCCTCTGAAGACGAATACAAACAGATGA
CCATCAAAAAAACCGGTGGACTGTTCATGCTAGCGATACGACTGATGCAGTTGTTTAGCG
AGAACAAATCGGACTTCACCAATCTGTCCGCCGTGTTGGGGTTGTATTTCCAGATCCGCG
ACGATTACTGCAACCTGTCGATGAGGGAGTACACAGAGAACAAGAGTTACTGCGAGGACC
TCACGGAGGGGAAGTTCAGCTTCCCCATCATACACGCCATCAGGAGTCAGGAGGACGACA
AACAAGTCCTTCATATCCTCCGCCAAAGGACACGGGACGTTGAAGTGAAACGTTACTGCA
TCACGTTGTTGGAGAAGTTGGGCAGCTTCCGGTACACAAGGGGGATCCTGAACGATCTGG
ACGCGCGCGCCAGGGAGGAGGTGTCCCGTCTAGGCGGCAACCCACAGCTGGAGGCGCTGC
TGGACGACCTGCTCACCTGGAGACAGGAAGGCGACGACGCTAACGATCAAATGAACTACG
TTTGAGCGCAACTAAAGATGAGCTTAATTTATTATAAATATAAATTATTCCAAATACAAA
TAGTGAGGGTAGTTGAATTTGTTCCTTAAATTTTAGCGAAACTTTTGCTAATGTTATAAA
ACAGAAACTTAATTAAAGCGAGAAGTGAAAGGTTATTTGGTTTAAAGGACATCTTTGAAA
ATTACTGGTGGTAGGACCTCTGGTGAGTCCGCACGGGTAGGTACCA
(1066 bp)

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