SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22357_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		28S_ribosomal_protein_S29,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0003735 F structural constituent of ribosome
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
Transcript
Level		FPKM:8.52 TPM:3.81
ORF EntryO_BomaMSG12042_3prime_partial:A_BomaMSG_c22357_g1_i2
Sequence
(Nucleotide)
AGATGTTAGGTTATTTAGGTTATGTTATTGTTATTTTAAATATTTATTTAAATAGGTGCG
TTTATAATGTTTACCCGTAACTGGAAGCATCTTTGTCGCCGCTATTCTCAGGCAGTCACA
TTCAGAACAAGTGAAATCTATCCCGCTCAACACAATGAAAATCAAATAGGCCTCTTCTAT
ACTGTAAAGCCAGATCTGTGCAAGCAGTTGTTCAATCATGGTGGCTTACCAAAGAGTTTC
ATGAGGCAGACAAAGACATTCACAGAAACAGCCATAATGGTGCGGCAGCCTGCTTTGGAT
GTAATGGATTGCATCAGAGCCTCAGATATGAACAAGCCAGTTATAAGATATGTACTCTAT
GGTGAAAAAGGTTCAGGTAAATCATTGACATTGGCCCACCTCCTACACTATGCACTTGAA
GAAGGCTACCTTATTCTTCATGTTCCATGGGTGTCAGAATGGTTACGAAGAACTCCTCGT
CATAAAGAAATGACCAATTCTCAGACAAAAGAAGGCTTTGTCGATCTTCCCCTGGACGCC
GCCGAGTGGCTGTTGCATTTCAAGACTCAGAATCAGGCATTGCTGAAAAACTGTGAGTTA
AAAATCTCTAAAGATTATGAATGGAGCAAGCGAGAGAAGACCGAAGCTGGTTCCCCCATA
GCGGCACTCGTAGAGCACGGCATAAACAGAGTCAAATACGCCTGTGACGTCATCGATGCA
CTCCTCCTGGAGATCAAAATACTTTCTAGCAGTAAACAATGCAAAACATTCGTCGCTATT
GACGGCTTCAACAGTTTCTACTATCCAATGACGCGACTGAACACGCCCACCAAGAAGAAA
ATTAAGCCCGAAGAGGTGACACTGACCAATTCGTTTCTGGAGCTCACTAAGAATGATTGG
AACAATGGAGTTGTAGTATTAACAATAGATCAACTGGCTGTGCCAGATGAAAACCAGGAG
AGTTTCCTACCCAGATACTTGTTATACAAAAAGGGCTTTGAACATCTAGACCCCTTTGTG
CCTATCGAAGTAGGAAGATACAC
(1043 bp)

- SilkBase 1999-2023 -