SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22329_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ran_GTPase-activating_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000922 C spindle pole
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007062 P sister chromatid cohesion
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0016020 C membrane
GO:0016925 P protein sumoylation
GO:0030425 C dendrite
GO:0031625 F ubiquitin protein ligase binding
GO:0031965 C nuclear membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0046826 P negative regulation of protein export from nucleus
GO:0048471 C perinuclear region of cytoplasm
GO:0048678 P response to axon injury
GO:0071375 P cellular response to peptide hormone stimulus
GO:0072686 C mitotic spindle
GO:1904115 C axon cytoplasm
GO:1904117 P cellular response to vasopressin
GO:1990723 C cytoplasmic periphery of the nuclear pore complex
Transcript
Level		FPKM:4.34 TPM:1.94
ORF EntryO_BomaMSG11997_complete:A_BomaMSG_c22329_g1_i1
Sequence
(Nucleotide)
CTCTTCCGATCTTGAAAAAAAATCCGTTGGAGTATATAATTGCGTTTTTGCGTTATATTT
ATTTTCTATTTATTATATTTATTACATAAACTGTAAAATGGCCACTTTCGATTTAAATTC
ATTAAACACAGTGCTTGATGAGCCCGCACAGCCGGAAACCGGTGTCGATTTTTCTGGAAA
ATCTCTAAAATTGGATACCGCGAAAGATGCACAACTAATTGTAGACGCGATCAATAAATG
CCCGAACCTCCAATATCTTGCGTTGACCGGCAATACACTGGGTGTGACGGCCGCCCAGGC
GATCTCCAAGGCCTTAGAATCACACCCTGAACTCAAGATAGCCAGATTCTCGGATATGTT
TACTGGGAGAATGAAAACTGAGATCCCGCCAGCTTTGAGTGCTTTAGGTGATGGCATGAT
AGCAGCTGGAGCTCGTTTAGCTGTGCTGGACCTGAGCGATAATGCATTCGGCCCAATAGG
AGTTGAAGGTCTTGCTAAGCTGCTGCAAAGTGATGTCTGCTCTGACCTAGAGGAGCTTCG
TCTGAACAACAACGGCCTTGGCATAACCGGTGGTAAGTTGTTGGCACGCGCACTCTCCAG
TAGGAAGCGGAGACTACGGGTCTTCATAGCCGGGAGGAATCGGTTGGAAAACGACGGTGC
CACCGCGCTGGCCAAAGTTTTTAAGGAAATGGGCTCCTTAGAAGAGGTAGCTATGCCACA
GAACGGCATATACCATGTTGGTATAACGGCTCTATCGGAAGCATTCAAACACAACCCGGC
ACTGAACCATCTAAATTTGAACGACAATACTATTGGAGCAAAAGGTGCTGAAGCCATTGC
CAGTGCCCTACCAAGATTAAAGAATCTTAAAAGTATTAACTTTGGTGATTGCCTCCTGAA
GAGCAGAGGAGCGAGAGCTTTGGCTAAAGCTTTCAAGGGAAACTCGTTGCTATTAGAGTC
TCTGGACCTCAGCCACAACGAGATCGGACGAGAGGCGTGCATGGAGCTGGTGGATGCCAT
CACTGAGCTGCCCGACAGTCAGGAAAGACTCAGCCGGATAGTTTTGGCAGGGAACAGCTT
GGGCAATGCGGCCAACAAGAAGAGCCTCAAAGATAAGCTCGGTGCTTCAGCAGAGCTCAG
CGATGGGGAGGGCAGCGATGATGAATACGTGACCGAACCAGAGGGGGAAGACGACACGGA
CGAGAGTGAGGACGAGGACGAGGACTCCGAGGAGGCCGCGTCAGGAGACAGCTCCCCCGA
AGATATCCGAGATATAGACACCGTTATAGACGTTAAAGAAATTAGTTTAGATGATTCTGG
AAGAGAAGACATACAGTCCGACGTGGAGCGCTTCCTCAAGGATCCTTCCGTCAAGCACCT
GAACTCACTGGGCGACAGGGCAGCCGAGCTCATCGACGCTCATCTGCAGATGATCCGAGA
TCCGGATGCTATGACCGAGGCTTACGCTCAAGCGGTCCTGTGCGCCAGCGGGCTGTCGTC
CCGGAGCGCGGCGGCCACCGCCCTCGCCAAGCAACTCTACCCGCTGTTCATAGCCAGGGC
TAAGCGGCAAATGGCTCTGGCTAACTCGCTCTTACCGGGATTAGGACTTATCAAGTGGGA
GAACAAGGACTATAAGATACGGTGGGACCTGCCCGGCTGCTACAGCATCCTGGCCAACGT
TCTGGACGAGGCCTACTTCCCCGCCGGGCTCAGAGACACATTGAGATTTTTCATCACCAG
TAAGCTACCCACTCTGCCCACAGAAATAGAATTGGCTATAAAAAAACATCCGAC
(1794 bp)

- SilkBase 1999-2023 -