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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22316_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		A-kinase_anchor_protein_17A_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007165 P signal transduction
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042113 P B cell activation
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0051018 F protein kinase A binding
Transcript
Level		FPKM:3.29 TPM:1.47
ORF EntryO_BomaMSG11977_5prime_partial:A_BomaMSG_c22316_g1_i2
Sequence
(Nucleotide)
GTTCGTTAGTCATGAATATTCAAGTATGCAGGGACACTTCAGACGCTGTGGCGCTTTACT
TGCCACAGCGTTTGTATTTGAAATCGTATGCCAAGCTTAATATTTCTGTCCAGCTTCCCT
CTCACAAGGTACACGGCAAAACTATATCCAATTGGGAGCTCATGGAAAAACTGCGGAAAA
TGATCCAACCTGAGAGTTTTTCATTGTTAAAAGTGTCGAAACATAGTTCGGAAGTGATCA
GATTTGACGCGGAAATAGAAAATTATAGTATGCTAAAGATGGTGATTATGAGACTCGATG
AACGTGTTGTGAAGTTGAATGATTACCCGGAGCCCTTAAGGGTGAAAGTTTGTGAAGCGA
AGTCGGATTTCCCTTCTCGTCACGCTTGGGACTCGTTCTTTCGAGATGCGTCTGATATGG
ATGAGATGAAGCCAGGAGAAAGACCAGACACTATTCATATATCAAACCTGCCAATACGTT
GGTTTGTTCATAAAAATGAACGGGATGAAGACGCGATGCCTTCTGAGAGCTTATTCAAAA
AGGTCTTTGAAAAGTTTGGTAGGATACGTCAAGTGGACATACCTATTGCTGATCCATTTA
GACTTCAAATGAAATCAGCCATCAGAGGCATCATGTACCCGACAGAAGATGCAGCTGTGT
ATTTTGAAGGATATGTACAGTTTAATGAATATGTCGGTTTCGTCAGATGTATGGATGAAT
TGAGAGGCAAGAAATTAGTTAGAAAGCAGGATGACATTGCCGAGTGGTGTAGCATCAGGG
TTGATTTTGATAAGACAAAGCACATGACTGATGCAGCCATCAAGAGAAGGGCTATAGTTA
GAGAAAGACTTGCAGCACGAAAGAGTCACAAAGAAGAAGAAGAACAAGCGGAAAAATTGA
AAGCTGCTAAAAGAGAAGCAAAGGAAAGACAAAAATATGAATTGGCTGAAAAAGAGAAAT
TGGAGAAGATGAGGCAAAGAGAAGAACGGAGAAAGAAAAAGCAACTTGCCAAACTAATGG
AGAGAGACAATGTAGACCTGAATAGCAAAGTGGCAGAAGAACAGAAGAAGTTATTGAAAG
CTCAAAAAAAGTTACAAGCCATTAGGCTAGTTGCAGAATTGTTTAAGAGAATTGAGCTCC
GTCCAGAACTACAGCGTAATGGTGCTAAAACTCACAGAGCATACAATGAAAGCTTGAGGG
CTCGTGTCGTAGAAAAGTTCAAAAGGCAACAAGAAGAATTGTTGGAAGCACAAAGGAAGA
ATCTCAGAAGCGCACTTGATGGTCGTATAGTGATCCGTTCAGCTTTAGAAACGAAGAAGC
CGAGACGTACCTCTTCCCTCAGCTCTCTATCGGCTGACGAAGAAAATCAACTACGGATAA
AAACAGAAAGAATCCCAAGTCCGGACTCGAGAATGCAATATGATAAAACACCTGTTCCTG
CGATGTACGGGATGGCGAACCCTTATAGCTTCGGGTACCCGGCGTTCATGCCGCCAGGAT
ATGCCTATGGACCGCAAAGTATGAGTATCACAACATCATTTCACACTCATCTTCTTTGTA
AACAAACAACTGCACTCGGTCAATTAGTTAGAGATGTGTGTTCTGTTGGTGCAAGAGACT
GATATACTTTTTAATTTTAATTTTTTTATTGCTTAGAT
(1658 bp)

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