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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22281_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_DHX8_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:3.90 TPM:1.74
ORF EntryO_BomaMSG11927_5prime_partial:A_BomaMSG_c22281_g1_i1
Sequence
(Nucleotide)
GGCAAGACGACGCAGATAACACAGTACGTGTGCGAGTGCGGGCTGGCGGCGCGCGGCAAG
GTGGCGTGCACGCAGCCGCGCCGCGTGGCCGCCATGTCCGTGGCCAAGCGCGTCGCCGAG
GAGTTCGGCTGCCGGCTGGGCCAGGAGGTGGGCTACACCATACGCTTCGAGGACTGCACC
AGCCCGGACACTGTCATCAAATACATGACGGACGGCATGCTGCTCCGCGAGTGCCTCATG
GACCTGGACCTGAAGGCGTACTCGGTGATCATGCTGGACGAGGCGCACGAGCGCACCATC
CACACCGACGTGCTGTTCGGTCTGCTCAAGCAGGCCGTGCAGAAGCGCCCCGAACTCAAG
CTCATCGTCACGTCGGCCACGCTCGACGCCGTCAAGTTCTCGCAGTACTTCTTCGAGGCC
CCGATCTTCACCATCCCCGGTCGAACCTTCCCCGTCGAAGTCTTGTACACCAAGGAACCG
GAGACGGACTATTTGGACGCCTCACTGATCACGGTCATGCAGATCCACCTGAGGGAGCCC
CCGGGGGATATCCTGCTGTTCCTCACTGGCCAAGAAGAGATTGACACGGCGTGTGAGATA
TTGTACGAGAGAATGAAGTCCTTGGGGCCGGACGTGCCGGAGCTGATAATTCTGCCGGTG
TACTCTGCGCTGCCGTCCGAGATGCAGACCCGGATCTTCGAGCCGGCGCCCCCCGGCTCC
AGGAAGGTGGTGATCGCCACCAACATCGCGGAGACGTCGCTGACCATCGACGGTATATAC
TATGTGGTGGACCCTGGCTTCGTTAAACAGAAAGTCTACAACTCGAAGACTGGAATGGAC
TCATTGGTTGTAACTCCTATATCGCAGGCAGCGGCGAAGCAGCGCGCCGGGCGGGCGGGC
CGCACCGGGCCGGGCAAGTGCTACCGGCTGTACACGGAGCGAGCCTACCGGGACGAGATG
CTGCCCACGCCCGTGCCCGAGATACAGCGGACCAACCTCGCCACCACCGTATTACAATTG
AAAACAATGGGTATAAACGATTTGCTGCATTTCGACTTCATGGACGCGCCGCCGGTCGAG
TCGCTCATCATGGCGCTGGAGCAGCTGCACTCGCTGTCCGCACTCGACTCCGAGGGACTC
CTCACGAGGCTGGGACGCAGAATGGCCGAATTTCCACTAGAGCCAAACCTATCGAAGATT
CTGATCATGTCGGTGGCCCTGCAGTGCTCGGATGAAATACTCACAATAGTGTCGATGCTG
AGCGTACAAAACGTGTTCTATCGGCCGAAAGACAAGCAGGCGCTGGCCGACCAGAAGAAG
GCCAAGTTCAACCAGCCGGAAGGCGACCACCTGACGCTACTGGCCGTGTACAACAGCTGG
AGGAATAACAAGTTCTCGAACGCGTGGTGCTACGAAAACTTCGTGCAGATCAGGACGTTG
AAGCGGGCCCAGGACGTGAGGAAGCAGCTCCTCGGGATCATGGACAGGCACAAACTAGAC
GTAGTTTCAGCCGGTAAGAATACAGTTCGCATACAGAAGACGATATGCTCGGGCTTCTTC
AGGAACGCGGCCAAGAAGGATCCCCAGGAAGGATACAGGACGCTCGTGGACAGTCAAGTT
GTTTATATACATCCTTCCAGTGCACTGTTCAACAGACAACCGGAATGGGTAATCTACCAT
GAGCTAGTACAGACTACAAAAGAGTACATGAGGGAAGTCACGACCATAGACCCGAAATGG
CTGGTAGAGTTTGCTCCTGCCTTCTTTAAATTCTCGGACCCAACAAAACTCTCTAAATTT
AAGAAGAACCAGAGACTGGAACCGTTGTACAATAAATATGAGGAGCCGAACGCTTGGAGA
ATATCGAGAGTCAGACGCAGAAGAAATTAGTGGTATTGTTTATGTCTGTGTACGTCTTGT
ACAGATAATAAAATAGAATCATAATATTCGTAAAAAAAAAAAAG
(1964 bp)

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