SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22271_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		autophagy_related_protein_Atg12-like_protein_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0006501 P C-terminal protein lipidation
GO:0006914 P autophagy
GO:0009267 P cellular response to starvation
GO:0016236 P macroautophagy
GO:0019776 F Atg8 ligase activity
GO:0031386 F protein tag
GO:0034045 C phagophore assembly site membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0035096 P larval midgut cell programmed cell death
GO:0044804 P autophagy of nucleus
GO:0048102 P autophagic cell death
GO:0061723 P glycophagy
Transcript
Level		FPKM:9.97 TPM:4.46
ORF EntryO_BomaMSG11915_complete:A_BomaMSG_c22271_g1_i1
Sequence
(Nucleotide)
GATTGTTGTGTAAATTTTCGCATTATTGTCACAAACACACATAGAAAATAGAGTACCTAC
ATACATTTACGAATTTACAATTTCGAAAATCTCAAATGAGTGAAGAGAAACTTAAAGATG
AGACGCAGAGCCAATCAGTGGCTGGAATGGAAGCATTGAGAATAGAAGTTGATAACAAAG
AAAATAGTGATCCATCAAAATCAGATAAATTAAAAGTCGACATTCTACTGAAAGCGACAG
GGAATGCTCCTATAATGAAGAAAAAAAAATGGGCTGTTGATGCTGAAAAGCCTATTGGAT
GGATTATGGAGTTTGTAAAGAAATATCTCAAACTTGAAGCAGATGAGAAATTGTTCCTGT
ATGTGAATCAGACTTTTGCGCCATCACCAGATCAGATTGTCAGGAATCTTTATGAGTGCT
TCGGTACAGATGGGAAACTGGTCCTGCATTACTGCAAAAGCCAAGCTTGGGGCTGAAGAC
TGATGTTAATTATAAGGCTGCAACAACTATATTGAAGAAACACTCTATATTTAGTTTTGT
CAATCTGTTTGTTTTTATAGTTTATTTTCAATCATATGATTTGGAACATATTACCAAAAA
AATAATCATACAACCTATATTCAAATAGTCATTGTTGCATTATAACATAGTGTACCCTTG
TACGTGTAGTGTTCTTTAATAATATAGACATTACCAAGGCTAGCACCACCCTGCCTATTT
CTGACGTGAAGCAGTGATGTGTTTTGGTTTGAAGGCAGCCGTTGTAACTATACTGA
(776 bp)

- SilkBase 1999-2023 -