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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22235_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		transcription_initiation_factor_TFIID_subunit_2_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:3.16 TPM:1.41
ORF EntryO_BomaMSG11857_internal:A_BomaMSG_c22235_g1_i2
Sequence
(Nucleotide)
TACTTTGACAGAGAAATCAGCGCACATGTTTACGTATGGACATTCTGCTCGACTATGGTT
CCCATGTGTGGATAGTTTTGCTGAGCCTTGCACTTGGAAACTGGAATTCACTGTTGATGA
ATGCCTCACAGCTGTTTCATGTGGAGAACTAGTCGATGTTATTTATACACCTGATCATAG
GAGGAAAACATTTCATTATTTAGTGAATACTCCAGCTTGCGCACCAAACATAGCGTTGGC
TATTGGACCATTTGAAACTTATGTTGATCCTTTCATGAACGAAGTAACACATTATTGCTT
ACCAAATTTGCTACAAATATTAAAGAACACCGTAAGATATTTGCATGAGGCATTTGAGTT
CTATGAAGAAACATTATCAACTAGATATCCATATCCCTGTTATAAGCAAGTTTTTGTTGA
TGAGACAGAAGATGACGCAACTGCTTACACAACTATTTCGATATTAAGCACTCACCTTCT
ACACTCGATTGCTATCATCGACCAGACTTACATCAGCAGGAAGGCAATGGCACAAGCAGT
GGCCGAGCAGTTTTTCGGTTGTTTTATAACTATGCAGAACTGGTCAGATCTGTGGCTAGC
AAAAGGTATACCTGACTATTTATGCGGACTGTACTCCAAGAAATGTTTTGGGAACAACGC
CTATCGGTATTGGATACATCAGGAGTTGAAAGAGGTGATGGGTTACGAAGAACAATACGG
CGGTATAGTCCTAGACCCGTGGCAGCCGCCCGCTAGTGGAACCAGGATTGAACCCAATGT
CTTCTATTTCCCCGTACGCAATGTTCATACCATGTCGCCGCGGTATATTGAAGTTATGCG
CAAAAAATCTCATTTGGTATTAAGAATGTTGGAGCAGCGTATTGGACAAGAGCTCCTGCT
TCAAGTATTTAACAAGCAGTTGGCGTTGGCCACCAATGCGGCCAATACAAAGATCGGGAG
TGGGCTATGGGGCCACTTGTTGCTATCGACCAACTTGTTTGTCAAAGCTATATTCACGGT
GACTGGTAAAGATATGGCTGTGTTCGTCGATCAGTGGGTGAGGACCGGAGGGCACGCCAA
ATTTCAGTTGACATCAGTCTTTAATAGAAAAAGGAACACCGTAGAACTTGAGATACGACA
GGATTGCGTGCACGAGCGCGGTATACGTAAATACGTGGGTCCCCTGCTCGTCCAGCTGCA
GGAGTTGGACGGTACATTCAAGCACACATTGCAGATTGAGAATACGGTGGTCAAAGCCGA
TATAACTTGTCACAGCAAGAGTCGGAGGAATAAGAAAAAAAAGATTCCTTTGTGCACAGG
AGAAGAAGTAGACATGGATTTGTCTGCAATGGACGATTCTCCTGTACTATGGATTCGTCT
GGACCCGGAGATGTCGTTACTGCGTAGCACTATAATATCGCAGCCGGACTACCAATGGCA
GTACCAGCTACGTCACGAGCGTGACGTCACCGCGCAGAGCGAGGCCATAGACGCGCTGCA
CACGTTCCCCGAGCCGGCCACGAGGAAGGCTCTCACGGACACCATTGAGAACGAACAGAC
GTTCTATAAGATACGGTGTAGGGCAGCACATTGTTTGACAAAGGTGGCGAATGCAATGAT
AAGTTCATGGGCGGGTCCGCCGGCGATGTTGACGATCTTCCGCAAAATGTTCGGTTCGTT
TTCCGCGCCGCATATAATAAAGCAGAACAACTTCGACAACTTGCAGCATTACTTCCTGCA
GAAGACTATACCGGTCGCCATGGCTGGTCTCCGGAACATCCACGGCATCTGTCCACCGGA
AGTCGTGAAATTCCTCTTAGATCTCTTCAAGTACAACGACAATTCGAAGAATCATTTCTC
CGATAATTACTACAGGGCTGCTTTGGTGGACGCTCTCGCTGCCACGATCACTCCGGTCAT
ATCCGTGCTGCAACCCGGCGCGCCGATAACGGCGGACTCCCTGTCGGCGGACTCCAGACT
GGTCCTGGAAGAGATAACCCGGGTCCTGAATTTGGAGAAGGTGCTGCCGTGCTACAAGAA
CACGGTGACGGTGAGCTGCCTGCGCGCCATCCGCCGCCTGCAGCAGTGCGGCCACCTGCC
CAGCACGCCCATGATATTCAGGGCCTATGCGCAGTACGGACAGTACATTGATGTGCGACT
GGCGGCCTTCGAGTGCCTGGTCGAGTTCGTCCGCGTGGACGGGAAGCCGGAGGACCTGGC
GTCGCTACTGACCGCCGTGGAGAGCGACCCCGACCCGGGCGTGCGGCACGGCCTGGCGCG
CCTGCTCGTCGACACGCCGCCCTTCGAGCGCGCGCAGAGGCACCGCCTCGACTCCGAGAC
GGTGGTGCACAGAATCTGGAACAATATAAACAGTAATTTGTCGAACGACGCTCGTCTCCG
GTGCGACCTTGTGGACCTGTATTACACGTTGTACGGCGCTAAACGTCCTATTTGCTGTCC
GTTACCCGAAATACAAGCGATGATAAAGCAGAACCATCAAAAAGAACGAGAACGCCTCGA
GAGGGAACGAGAAAGGGAGAGGGAAAAGGAAAGGGAGAGGGA
(2562 bp)

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