SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22215_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		4-coumarate--CoA_ligase_1,_partial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
Transcript
Level		FPKM:10.74 TPM:4.80
ORF EntryO_BomaMSG11812_complete:A_BomaMSG_c22215_g1_i2
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGGAGACTGTGCTTAAGTTCTGCGTTTAGGGACTCTGACAAATTT
ATCGTTTCCTCACCGATTCCCGATATAGTTTTGCCGCAGACAAGATTCATCGACTATTTG
TGGAAAGAATCGGGAAGTTACAAAAATCTAATTGCCATCGAAAGTTCGGAAACAAAGAAG
ACGTACACATACACACAGCTTCAGAGAAACACATCAGCATTTGCCACTTCCCTGCTGAAG
AAGTTGAAGTTAAATCAAGGCGATGTGGTCGCGGTAATGCTTCCGAACTGTCCCGAGTTT
CCTGTCGTTGCTTTCGGGACAATGCAGGCTGGGTGTATACTGACAACTGTCAATCCTCTT
TACAAGGAAGCGGACATCGGTCATCAAGTGGCAATAACTGAACCGAAACTGTTCATCACG
GCTGCCGAATGCTACGATAACGTGACGAAAGCTTTGAAATTCGCTAAAAGCGATGCCAAA
ATAGTCCTGATCGACGATCAAAGCTCACCGATACCTAGCGGCACAATCAGATATTCCGAA
CTAGCTGAAAAAGCCGAGATAGATAACGGTGTTTTAGACAAAATCGAAAAGAAAGACGAC
GACGTTGCGTGCATACCTTTTTCTAGTGGAACTACGGGTATGCCTAAAGGTGTAGAGATC
ACATACAGGAACCTTATTGCGGGAATGGTCTGTATGCATATGAAAGAAAACTGTTTTCCT
CAGTTGGCGACAGGGTTATCAAATCAAGACATTGTTCCATGTATCCTCCCTTTCATTCAC
ATATATGGCCTCGTGATAAGTCTAATGGGGCATTTGTCTAAAGGCTGCAAACTGGTCACA
ATGTCAAAGTTTTCGGCCAATCTCTTTTTCGATGTACTGAAGAACCAAGATGTTAGTTTA
CTATACATAGTGCCTCCTATAGCGATATTGTTGGGTAAACATCCAGATGTACAGGCAGAA
CATTTCCGCAGCGTTCGTAATATAATCTGTGGGGCCGCGCCGTTGGCGGCTTCAGATGTC
GACGCCATATTGGAAAAGAGTAAAAAAAACATCGAATTCAATCAAGGTTTCGGAGCTACA
GAAACAACGTCACTGGGCACGTCGACCTTCAAAGGCTCCACTAATGTAGACTACTCTGCG
TGTGGAATGCCCATGGTCAATTTCAAGCTGAAATTCGCTGACCCTGTAACTGGTGAACCT
ATACCGATCGGCGAACAAGGCGAAATGTACATGAAGAGTCCTACAGTGATGAAGGGCTAT
CACAAGAACCCTGCTGCGACTAAGGATACAATCACGGAAGACGGATACTTCAAGACCGGT
GATCTCGGATATTATAAGCCGGGCGTTGGTCTGTTCATCACTGATCGAATAAAGGAACTC
ATTAAGGTGAAGGGTATGCAGGTAGCCCCCGCCGAGCTGGAGAGTCTCCTCCGCTCTCAC
CCGGCCGTGGCCGACGCCGCCGTCATAGGAGTCCCACATGAGTTCTACGGTGAAACGCCT
AAAGCGTTCGTCATCCGTAAAAACGGTCACGACATTTCGGAGAAAGAGCTACAAGCCCAC
GTTGCTAGCAAAGTGGCCGTGTACAAGCAGATAGAGGAGGTGGCTTTTGTTGATGCTATA
CCAAAGACAGCCTCCGGGAAGATACTGAGGAAGGACTTGAAGAAGATGTATGCGTAGATC
GCAAACAATACCGTTGCAGTTGAGGGAATGTCCAAGATTTTATACTGGTGGTAGGATCTC
TTGTGA
(1746 bp)

- SilkBase 1999-2023 -