SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22193_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		presenilin-like_signal_peptide_peptidase_[Bombyx_mori]
Ontology
GO:0004190 F aspartic-type endopeptidase activity
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0008233 F peptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030660 C Golgi-associated vesicle membrane
GO:0031293 P membrane protein intracellular domain proteolysis
GO:0031625 F ubiquitin protein ligase binding
GO:0033619 P membrane protein proteolysis
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0042500 F aspartic endopeptidase activity, intramembrane cleaving
GO:0042803 F protein homodimerization activity
GO:0051289 P protein homotetramerization
GO:0071458 C integral component of cytoplasmic side of endoplasmic reticulum membrane
GO:0071556 C integral component of lumenal side of endoplasmic reticulum membrane
GO:1904211 P membrane protein proteolysis involved in retrograde protein transport, ER to cytosol
Transcript
Level		FPKM:77.32 TPM:34.55
ORF EntryO_BomaMSG11754_complete:A_BomaMSG_c22193_g1_i2
Sequence
(Nucleotide)
TTCTTGTCAAAAACTATCCGTAGGGGAAAGTTGTCTTATAAATTGTATTTCTGCATTATT
TTCTATAAGAAATGGCAGATATGGCCTCAGAAATACCTATAAACATCGAAGATAGTGTTA
AGGAAACTATACAAAATGTAACTGAGAAGCCTCCTTCAAGTATTGAAGGGATTGCGATTG
CATATTTAAGTTTAGTGATAATGGCTATTTTACCTATATTTTTCGGTTCATTTCGATCGG
TGAAATATCTAAACGAGCAAAAGAAAGCAGGAGAGCGTCATGAAACAATGTCCAACAAAG
ATGCTCTGATGTTCCCGTTGGTTGCATCATGTGCTCTTTTCGGACTATATATTTTCTTCC
AATTCTTCTCAAAGGAGTATATCAATCTGCTACTAACTGGCTACTTCTTCTTCCTTGGAG
TTCTAGCATTGAGTCATCTGCTTAGTCCGATCATCTCGTTCCTGGTACCAGCTTCGATAC
CAAACATTCCGTTCCATATTCATTTCACCCGTGGTGAGAGAGACAACAAACAGGATATCA
TCAATTACAAGTTCACATCCTATGATGTGATCTGTTTGCTCATCTCGCTCTGTCTTGGAG
CTTGGTACTTGCTTAAAAAGCACTGGATCGCCAATAATCTGTTTGGAATAGCGTTCGCCA
TTAACGGTGTGGAGCTTCTGCATCTGAACAACGTGGTGACCGGCTGCATCCTGCTCTGCG
GACTCTTCCTGTACGACATCTTCTGGGTGTTCGGTACCAACGTCATGGTGACCGTCGCCA
AGAGCTTCGAGGCTCCTATCAAACTGGTGTTCCCTCAAGATTTGCTGGTAAACGGTTTGA
ACGCGAGCAACTTTGCCATGCTGGGGCTGGGTGATATCGTGGTGCCCGGCATCTTCATAG
CTCTCCTGTTGCGCTTCGATAAGAGCCTCAAACGGAACTCTGAGTTTTACTTCAGGGCTA
CGTTCAGCGCGTACATCCTGGGCCTGTTGGCGACCATCCTGGTGATGCACGTGTTCAAGC
ACGCGCAGCCCGCGCTGCTGTACCTCGTACCCGCCTGCCTCGCCACCCCGCTCGCCCTGG
CGCTCCTCCGCGGGGACCTGCCCGCGCTCTTCAAGTACGAGGACCAGCCGGCGGAGCCCG
AAGCCGAAAAATCTAAGAAGTCCGAATAAACTTCGCCCGTTAGCGAGAAGCACAACAAAA
GCGCACGATGCAGACACAACTTTATCCATATTTTTGTATAGTCGCTCCGACCTTGTCGCA
CGCTAACATTCAGCGATACGTACGAGAGGGACGGGTCATTTCAAATTATGTTATGTACGT
ATTGTACGAAATCTAACTTAACCTCGTGGGGATGCATTTTACTCAAAGCGGCGTCTGACA
TTCGCCGAATCGGCTGTTTCAATAATATGACAACTAGGTGACATATTGACAGCTGTCACT
TTATAATGTCCCGCTGACCGAAATTTAATTGCGTATAACTTGACTAATTTATAACAACAC
TATTACTTTAAGTAATTTTTTTTTTTCAATTTCTTATGTTTTTCTAATACACGAAAGAGT
TTAGGAATATTATTGAAAAAGCCGATTTCCTTTTCGAAAATTGTATATGTAAATATTGGT
GTTGTGAATTTTTCTATATGAAATAATAAATAGCGTTTTTGACAATTAGTTTTATTGTTT
ATATTTCTCTTGAATTCTTGACAGCAACTAACATTATTTTCATAATAAATGTCTTGTAGT
TTTTTTTAACTCGCGCTCAATGAAGTGTTGTCATTTTAATACAAATCTAAAATCAAATAT
TTACACGACCATACCAAAACGTTGAAACGAATTACTTATCGCGGAGCTGCAAATAAAACT
CAATGTCAAAAGCGCCATAGAATAGTCACGGTAAGATAATTACCTACTTATTTTAGAAGG
GTATTTTCTTCCTAAAATTCTTCCTTTGGAACGTATGAATTTTTTTTTTTTAAATAAAGT
ATATTAGTTTAGTATAAAATTTTATTATAAAATCGAAGATTCTAGATATTTTTTAAATTT
TATTTTCACTGGCAATTGCAATATTAGTTGTTTTAGAATGCATAGTTGAAACCGATCTAA
CTAGGTTAGTGATACTAAAAGCCGTAGGTACTCCATGATCCATACTCGATTTCCAATCAT
AGTGATTAATATATTTGACATACAGGGTCTGAATGTACTAGTCCAAGCTCCCCCAGTTTC
AAAGTGAGCTGCAGAATTTACTTGGAACTAACCAGTAAATGCCAAGTAGACTATCAATCC
GGGCTTAACACAAAAAAAGCTACCTAATTTTGAAGTAAAAACTTCTTTACCATCGTTGTG
ATTTGAAATTCGATGAAACAAGACAATATTTAACCTAGAAGTATATCCTTCTATAGTGTC
GTTTCATATTCGCATAGAATTTTATTCCTACCCTCTTAGACAAATACAATATTTTGTAAT
TTAAAGTTTATTAATTAATTTTTTTATTCTATGTGGTTTTGTCTTTCCATGCTGATGTTA
ATTTTTTTTAATTAACATCTTTTTATTTATAAATGTTACCGCACACAAGTACACACATTT
TGGTGTTCAAATAT
(2594 bp)

- SilkBase 1999-2023 -