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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22061_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		heterogeneous_nuclear_ribonucleoprotein_H_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008134 F transcription factor binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017025 F TBP-class protein binding
GO:0030529 C ribonucleoprotein complex
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:10.92 TPM:4.88
ORF EntryO_BomaMSG11530_5prime_partial:A_BomaMSG_c22061_g1_i1
Sequence
(Nucleotide)
GTCTCTGGTTTCGCTGGTTTTGTTTCGAGAATATTTTCTAATCTTTCTTTGTCAGTTAAA
AATTAAAATACTTTTGTTTTCAAAAATATAATTTACTCTATATTATTAATAGCAGGAGCA
ATGTTGGGGTCGGGAGATAGCGGCTATATTGTAAAATTGCGTGGCCTGCCTTTCTCCACC
ACCGTCGAAGATGTCATCGATTTTCTAAACGGGGTTAAAATAGTTGATGGGAAAGCTGGT
GTGTATTTAACTGAAATACGTCCAGGACGTCCATCAGGAGAATGCTTTGTAGAAGTTGAA
AGTCAAGAGGATGTGGACCTTGCACTCAAAAAAGACAAGGAAAATTTAGGAAAAAGATAC
ATTGAAGTATTTGCAACTGATCGGCAAGACATGGAATGGGCTCTTAATGCCATGCGGCAA
AATGAAAATGGATTTGACAATGTTCCATTTGTCTCTGATGACATGGGTATTGTGAAACTC
CGGGGCTTGCCTTATGGTTGCTCCAAAGAAGAAATTGTACAATTCTTTGATGGTATTCCA
GTGGCACCGGAGGGTGTCCACTTGCTCTCGGATCAGACGGGGCGGGCTTCGGGCGAGGCG
TTTGTATACTTCGTAGACAAGGAGAGCGCACAAGAGGCTCTCATCAGAGACAGGGAGAAA
ATAGGACACAGGTACATAGAGGTGTTCCCGAGCGACAGTGAGGAG
(705 bp)

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