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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22036_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:3.78 TPM:1.69
ORF EntryO_BomaMSG11488_complete:A_BomaMSG_c22036_g1_i1
Sequence
(Nucleotide)
CAAAGGAAAGGTCGTGCAGGAAGAACGGGTCCCGGCGTCTGCTATAGGATATATTCCGAA
CAACAGTACACGGATATGGAGCCGTTCAGTACTCCAGAGGTGTCCAGGGTCCCGCTGGCC
TCTCTGCTCCTGTTGATGAGCTCTTTAGGGGTGAACGACGTCAGGCGCTTCCCTTTCATC
GATACTCCGCCCGAGGAGAGCATCGAGAATGCTCTGTTGGAGCTCAAACAGCACGGCGCT
TTAACCTCAAACGAGAAATTAACAGCGCTAGGGAAAGCTTTATCGAATCTGCCAGTTGAA
GTTTCATTAGCGAAAGCCCTGGTCATCGGGAGCGCAACTTTACAGACGCACAAGAGAGAC
TCTGCTCTCGCGTTGACCGCCGCTTTAGGGATTCGTTCCATTTTCACCACTAGAGCGCAC
CGAGATTTCGATTGTGAGAATGCAAGGAAGCCTGATGAATCAGACCACGGTGACCCGCTG
ACATTACTGTCCTTGTACTGCGCTTGGTTGCGTGTCAAAGCTGAGGAGCGCGGCGGGAGA
AGCTGGTGCAAGAGGCGGGGCATCGAGGAACAGCGACTTTACGAGCTGACTAAATTGGCG
GCACAACTAAGAGGCCTCTTGCAGGACAACAATCTAGCTGAGACTCCTGAACCAGAGACG
ATGTCTTCAGCGGAGAGGGCGTTACGTCACGGCCAGATGAAACAGCTCAAGGACATGAGG
AGGCAATACAAACAGAAATCGGCTGAAGATTCGAAACGCAAGAAACGTTTGAAGATAGAC
TCGTGGGAGATCGTCGACGAGAATGAGAATGAGGATGACAATGTTTTCGATATAAGGGAT
ATTGAATTCCGTATGAGCAACGACGCTCAGAGGATCCAGGCTCTGATATCCGGCTCCAGC
GCGTCCAGTGGACGGGACCTTATCATGCTGGAGATTGTTTTAGCCAGAGCGCTGTACCCA
CAAGTAGCAGTTGCCGATGAATTCAATTATTGCAAGTCCGTAGCCGAACAATTGTACCAC
ACTTGGAGTAAGCCCTTCGTGTTCCTACACCCCACCTCGTATTTCGGGAAGCAGCCCCGC
GTGCTGATGCTGACAGAGGCGGACATACAGAC
(1112 bp)

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