SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22028_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		putative_ATP-dependent_RNA_helicase_DHX57_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.28 TPM:1.46
ORF EntryO_BomaMSG11481_3prime_partial:A_BomaMSG_c22028_g1_i3
Sequence
(Nucleotide)
CTCTTCCGATCTGAAGGTTTGAAATTTTCGATAAACCTCTCGCCAGACCCATAAATTAGA
TACATTTATATTTAGACCGATATTTTATTTACATCGCAACATGGATAATCAAAGTAAACA
ATTAGCTGAAGACTTTTTCTTAAGAGAGCCTGTAGACGCCCGCATCAGAAAAGTCAAAGA
TGAGCCCAAAGAAGAATCACACCCGACTCTCAAAGTTGAAATGCAAACGATTCGTTTGAA
TCCGGACTCACAGAAAATAATATTAGATACATTGAGGTATATCCATGGTTCTGAATTCAA
ATTGGGCAGTGCTAGTCTTTACAAGGATAAAGGTTCAAATCTGGGAAACAGGTATTGGAT
GGAAAGAGGCAATTTAGTTGTCCAAGGAGGATGTGACTATTCTCTTAACATGAAACCTGA
TATACAGAGCTCAGAAGCTAGACTTAGATCTTTTGCTCTATCAAAATTAGAAAAATACCA
CTTCCATAAAGCACATTGTTCAGAAGCCTTAGAGATAGCAGCAGAAAGTGTAGAAAAGTC
CCTAGAGATTTTATTTTATAAATATTTTAAGATAGACCCAGAGGATAAACCGGAAAACGC
CCTCTCAAATTCAGAGTTAGAAGAGATGAGAATGGATGAAAAAGCAGTATTAGAATCAAT
ATATGACACCAGTTTCAAAACGAAAGATGCAGATGTATGGGTTGTGAAATTAGATCTAGA
CTACTTAACAAAGCTATATGCAAATAAAGTTGATGCACCGAAAAAGAAAACAAACATAAA
TTACAATAATAAAGGGAAACCAAAAGAGATGTGTAAACTTATTTTAAAGGGACACTGTAG
ATTTGGTGATAAATGTAAGTTTTCGCATGAAATTAATACAGAGAAAACTCAGCCTGATAC
AGAAAACGCTGGAACTCAGAAAATTACTTATGAATTAGAAGTAAGGTTTCCGAAAGACAC
ACTGTATCCTTATCAACCCCCATTATTGTTTTTCAAAACAGAAAACCGTACTGATACCAT
ACCTGATTTAACTTGTTTAAAAATAACATGTAGACTTGTAGACGAGGCGAAAATTCTTGC
ACAAGATGG
(1089 bp)

- SilkBase 1999-2023 -