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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22018_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_dbp2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:28.04 TPM:12.53
ORF EntryO_BomaMSG11458_complete:A_BomaMSG_c22018_g1_i1
Sequence
(Nucleotide)
CCGAGAACTAACATGGCGCTCGTTTGGCTTTGGCATCAGTTGTGCTAATATGTCTGCGAC
TGTGTTTATCAATAATTGCTTAATTTAAACGTAATATAATTGCAACCAAAGTACCTACTC
TAAATAGTAATTCAACTGTAAATTGAGAGTGGTAGTTAAACTACTTCATATAAGCTAGCA
TCATGTATGACGATAGACGTGGTGGCCGTGGTGGAAGAGGTGGGAGTCGCGGAGGGCGAG
GATCCAGCCGCGGTGGTCGGGGTAGCGACAGGTCGCAAGAGCGCGGACCTAGTCGATTTA
GCGGAGGTCGTGGTCGGGATGGTGGACGCGGCGGTAGGGATGGCGGCCGTGGAGGGCGAG
ACAGTGGCAGGGGTTTTGGGAGAATGGGGAATCGGGATGATCGCTCCAATTTCAAAAATG
ATCAGCCTGGCGGTAACCTTCGAAAAATTCACTGGGACACCGTAACGCTCACACCATTCC
AGAAAAATTTCTATGTCCCTCATCCGAATGTTCAACGTCGAACTCAAAGCGAAATTGAGG
CCTATCGTAGCCAACATCAGATAACTGTGAAAGGTCGAGACGTGCCTGCCCCTAGCATAT
TTTTTGAAGAGGGTGGTTTCCCTGACTATGCTATGAAAGAGATTTTAAAACAAGGTTTCC
CGAACCCCACTCCTATTCAAGCACAGGGCTGGCCAATAGCTCTCTCTGGCCGTGACATGG
TGGGCATAGCCCAAACTGGGTCAGGCAAAACCTTGGCATACATTTTACCAGCCATAGTAC
ACATAATTAATCAACCGCGTCTGCTAAGAGATGATGGTCCAATAGTCCTTGTGTTGGCTC
CAACAAGAGAGTTAGCCCAACAAATACAGCAGGTTGCCAATGAATTTGGTCAAAGTATCC
ACGTGCGGAACACTTGTATCTTTGGTGGTGCTCCAAAGGGACCACAGGGCAGATGTCTTG
AGAGGGGAGTGGAAATTGTTATTGCTACTCCTGGTAGACTCATTGATTTTTTGGAGAAGG
AGACAACGAACCTGCGCCGATGCACTTATTTGGTGCTGGATGAGGCTGATAGAATGTTGG
ACATGGGCTTCGAGCCTCAGATCAGGAAGATTATTGAACAGATTAGACCTGATAGACAAG
TATTGATGTGGTCAGCTACATGGCCCCGAGAAGTACAGAATCTAGCTGAAGAGTTCCTGC
ATGACTACATCCAGATCAACATTGGTTCTCTCGAGCTCTCGGCCAACCACAATATCCTCC
AGATTGTTGATGTTTGTGAGGAATGGGAGAAGAATGATAAATTGATTACATTGCTTACTG
AGATATCTTCAGAGGAGGAAACCAAAACTATTATATTTGCTGAAACCAAAAGGAGGGTTG
ACGACATATGTAAGGCGATAAACCGTGCCGGCTGGCGTGCCCTCGCCATCCATGGGGACA
AGAACCAGCAGGACCGCGACTACGTGCTGAACCAGTTCCGCCACCACGCCGCCGCCATAC
TGGTCGCCACCGACGTCGCCGCCAGGGGCCTCGATGTGGAAGATGTGAAGTTTGTGATAA
ACTATGATTATCCAAATAATTCTGAGGATTACGTGCATCGTATCGGCAGGACGGGACGGT
CCCAAAACACCGGCACGGCCTACACACTCTTCACTCCTAATAATTCAGCAAAGGCTAGAG
ATTTGATGTCAGTACTTCAGGAAGCCAATCAAGTTGTGAATCCGAAACTACTAGAGTTGG
CGCAATGTGGCATGGGATTCAAAGGAAAATTCGGTCGTTCAAGATACCGAGATGACGGCG
GCAGGGGACGCGATGGAGGCAGATCGGAAGAGCGTC
(1836 bp)

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