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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21989_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		transcription_initiation_factor_IIA_subunit_1_[Bombyx_mori]
Ontology
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0005634 C nucleus
GO:0005672 C transcription factor TFIIA complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0017025 F TBP-class protein binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:17.75 TPM:7.93
ORF EntryO_BomaMSG11407_complete:A_BomaMSG_c21989_g1_i2
Sequence
(Nucleotide)
TTCCTCTGTTTGTAGGTTATGTTTGAGTGATCAATTGTCAAAATTTTTATGGTGAATTTA
TAAATTTGTCTCTCTTTATGTAAATGGACGTCATAAAAGTTAAAATAAATTGCTTTAGCT
ACATATTATCTTAAATATAAAAAATTGGTCATCAACATTAGTGAATTAACAAACTGTGTG
AATTCCAGAAATTTGACATTGAAATGTTGCGATGTGAACTCAGAAGACAAATAATCGGCT
CCAAACTAAACTAAACAGATTTAGAAACAAGAATATCTAGTTCTGTGAACATTTTACACT
GTTAAACAAATTTCAACTACAGCTCGATTGCAAAATGACAACGAGTCAGCTCGCAGTATT
GAAACTTTACAACATAGTGGTAGACGACGTGATATCCGGAGTGAGAAATTCTTTCTTAGA
TGACGGTGTAGACGAACAAGTGCTACAAGAACTAAAACAACTATGGAAGACAAAGCTTCA
AGCCAGTGGAGCCACGGACCCGTTACAACCTGAGCCGATGCTGCCACCTCCTCCAGTGTT
ACAGAATTTCCAAAAAGTAAATGGTAGTAATGTAGTGCATAAAAGAACTGACATGGGACA
TACTTCGGGGCAACAAGAACATAGTGCACCAGCATCTAGTGTAGCTGGAACGCATACTCA
TCATATTCTAGACCCTAATAATAAAGTGCCAGTTCAGCTTACATTACCTGCTCAACCTGG
AGTTCCAGGGTCCCAACCTCGTTCATTTACCATTCAAATTCCAGCATCAGCTCTGAACGG
CAACAAACTGCATCAGGTCTTAACAGGTCCTATAATAAATGCTACCATTAGCCTTCCGCA
ACCTCTAGCTGCTACTTTACTGCAACAACATATCAACTCAGCTTTAGCAGGACAAAAAAG
TGATTTTGACAGCGGCGGAGGCGGCCGCAGTGGAGCTGCTCCTTTCTCTTTAGATGGTGC
TCTGGACTCTTCTGATGAGGATGGCTCAAACGTAGGTGATGGTTCAGAAGACGGTGCAGC
AGATGATGATGATGATGACGATTCTCCCGAAGAGCGGGCAGAAGAAGAAGAAGAAGAACA
AAATGAAAGTGGTGGTGCTGAAGAAGAACCCCTAAATTCCGGTGATGATGTATCTGATGA
GGAGCCAGGGGACATGTTTGATACTGATAATGTAGTTGTTTGCCAATATGATAAAATTAC
ACGCAGTCGCAATAGGTGGAAGTTCTATCTCAAAGATGGAATCATGAATCTAGCTGGAAA
GGATTATGTATTCCAAAAGGCTAATGGTGATGCGGAATGGTGATTATAGACAGTGTGTAT
TTTATAGAAAATTATTTGTTATATCTCGGAATTAGGGCTTAAGGTCTCATAATTATTATT
TCGTTATTTCGACATGTAATTTGATGTCTGTATGGCAGATATCTGTGTAACAAGTTTAGG
ACAAGATTGTTAAACAAATTATGAAAAAAAAAACAATCTTTCGTAGGTAGATTTGAAGTT
TTCTAAGACACTAGTATTACCAATAGTAAAAAACTCTACCAAGCTCCTTCAGTCTCACTT
CCCATTAGTGTGTTTTTTGTACACTACTGAGACTACTACTTACTACTATACTTACAAAAA
AAAACACTAAAAA
(1633 bp)

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