SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21987_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ornithine_aminotransferase,_mitochondrial_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0004587 F ornithine-oxo-acid transaminase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006591 P ornithine metabolic process
GO:0008483 F transaminase activity
GO:0010121 P arginine catabolic process to proline via ornithine
GO:0016740 F transferase activity
GO:0019544 P arginine catabolic process to glutamate
GO:0022008 P neurogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0055129 P L-proline biosynthetic process
Transcript
Level		FPKM:1.87 TPM:0.83
ORF EntryO_BomaMSG11401_complete:A_BomaMSG_c21987_g1_i1
Sequence
(Nucleotide)
CAGCGTGGCAGCGTTCATAGAAGTTCATTTCGTCCGTCAGTCGCTGATTTATTTTGGACG
TAGACACACCTCTGTGTCGGACGGTCAGATTGAAACAACAACGCAGGCACAATAGTACCG
TACCATACCGTAACAATTTTGTAAAATGAGTGTTCGTGTGGGATGTCGAAGGAAAAAAGT
ATTATGATTTTTTAAGCGCCTACTCCGCAGTTAACCAAGGTCACTGCCACCCTAGAATAA
TTGAAGCTTTGAAGAAACAAGCTGATAATTTGACACTAGTGTCAAGAGCATTTTATTCCG
ATCAACTTGGCAAGTATGAAAAGTATATGACAGAGTTATTTGGATATGATCGCCTGCTTC
CTATGAACACGGGTGTTGAAGGAGGTGAAAGTGCATGCAAGATAGCACGTAAATGGGGGT
ACGAAGTCAAGAAGATACCTGAAGGCCAAGCTAAGATAATTTTTGCGGAGGGAAACTTCT
GGGGTCGAACCCTATCGGCGGTATCATCATCATCAGACCCAACCTGCTACCAAGGCTTCG
GCCCGTACATGCCGGGCTTCATTCTTATTCCCTACAACGACATCCCCGCTTTAGAGAAAG
CTCTCCAAGATCCGACAGTCGCGGCTTACATGGTTGAACCGATTCAAGGAGAGGCAGGCG
TCGTAATACCTGACGACGGCTATCTCAAGAAGGTTCGAGAGCTATGTACAAAGCACAACG
TGTTGTGGATTGCGGACGAAGTACAGACTGGATTAGGTCGCACAGGCAAGTTGTTGGCTG
TGGAACATGAAGGCGTGAAACCAGACATCCTAATACTTGGCAAAGCACTCAGCGGGGGTG
TCTTGCCTGTTTCCGCTGTTCTAACTAGCAACGGCATTATGGATGTGATAAAGCCAGGCA
CTCACGGATCAACGTACGGAGGAAACCCTCTGGCGTGCGCTGTAGCCACAGAAGCTATTA
AGGTGCTACTGGATGAGAAGTTATCGGAAAACGCTGAGAGGATGGGCAAAATACTACGCG
AAGAGCTGAGTCAGATACCAAAAACACAGATTCGTACAGTTCGAGGAAGGGGACTGATGT
GTGCTATTGTAGTGGATGACAAAATTCCAGCATCGGAGTTGTGTCTCCGCCTGCGCGACA
ATGGCCTGCTAGCGAAGCCGACGCACGGACAGACCGTGCGCCTCGCGCCGCCACTCGTCA
TCACAGAGGCACAGATACGAGACGGCGCTGATATCATCAGGAACGTCTTCCAAAGCTTCC
AAAAATAAATATGAGTCTATTTGAAGGTCCATTAGCTCATAAATTGTCTTACAAAGCCAC
TATGCACTTGTCTTAGGTGCGGTACATATTATTGAGTTTTTTCTTAATTCATGTAATATA
CAAAAAAAATTAAGAAAGTTCTCTTTGTAAAATGAGATACTTACTAATCATTACGATTTG
TTTTTATTACTATAATTATGTTTTATGTATTCGTAATAAATAAAAATTGTCTTAAGGTTT
TTTAAATTTGATTATGATTGTATATGAGGTTGCCACCTTTTTTTTGCAGATAAAGTACAT
TGGTTATTTTAGGTAGGAAAAAAGTACATAGTATTAAAATAAAGTGCAATTTATTTATTT
ATTTATTATTATTATTATGTTTAGATACCTACATATTTTTATTTTTATTGAACAAATTAA
ACAAGAAATTGTGACAATTAATGACAGTGACATTGTTGACATTTGAGGTTAAGTTGCGTT
CAAAAATATTTATTAAAAAAACGAGTGCTTAGGTGATGTGGCGTTAACGAAAAAATACAA
ATGACTAAACTTTTCATTATCCCAAAGGAACTAAATCATGCGAAATAAAGTATTTTCGCG
TATTTACGTAATTATAAAGTACGGGTGGCAACCCTAATTGCATACCTACTATTTACTATA
GTGTAGATTTAGAAACGAATAATTAATTTTATTTACACTCAATTCATATGGATATGAAGC
ACATATATTTACTATCAAAATAAAACAAATTTGAATAACAAAAAAAAAA
(2029 bp)

- SilkBase 1999-2023 -