SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21976_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		serine/threonine-protein_kinase_minibrain_isoform_X4_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006468 P protein phosphorylation
GO:0007623 P circadian rhythm
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030529 C ribonucleoprotein complex
GO:0042802 F identical protein binding
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0043621 F protein self-association
GO:0046777 P protein autophosphorylation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0048156 F tau protein binding
GO:0090312 P positive regulation of protein deacetylation
Transcript
Level		FPKM:3.26 TPM:1.46
ORF EntryO_BomaMSG11389_5prime_partial:A_BomaMSG_c21976_g1_i2
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTTAAACCAGAAAATATATTACTATGTAATCCAAAACGGTCAGCG
ATAAAAATCGTGGACTTCGGCAGTTCGTGTCAACTAGGACAAAGGATATACCAGTACATC
CAGTCGAGGTTCTACAGGTCGCCGGAAGTATTATTAGGGATCCCATACGATCTCGCGATA
GACATGTGGTCGCTCGGCTGTATATTGGTCGAGATGCACACGGGCGAGCCACTCTTCAGC
GGGGCCAACGAAGTCGATCAGATGAACAAGATCGTCGAGGTTCTCGGAATGCCACCGGAT
CATTTACTAGATCAGGCACACAAAACGAGAAAGTTCTTCGAAAAATTGCCGGCGTCTGAC
GGCGGTGGTTACGTTTTGAAGAAAGTCAATGGAAAAGATGGAAGCGGGTACAGAAAGTAC
CGAGCGCCCGGCACGAGGCGGCTCCACGACATCCTCGGCGTGGAGGGAGGAGGACCGGCG
GCCCGACGACGCGGCGAGCCCGGGCACTCCGTCTCCGACTACCTTAAGTTTAAGGACCTC
ATACTCCGCATGCTGGAGTACGACCCGAAACAGCGCGTGACCCCCTACTACGCGTTACAG
CACAACTTCTTCAAGCGGACCGCGGACGAGTCCACCAACACGCAGCAGCAGGCCACCTCG
CACCACCAGCACGGTGCAGTCGCGGGCGTTGGACGTGTGTGGGGCGCCGAGCGGATGGAC
GTTGAAAGCGCGCGGCGTGATGACGACATGCTGCCCGCAGTTTGCACGCACAGCCCCGTC
GCTATACACTAGCGCTCCCCGCC
(803 bp)

- SilkBase 1999-2023 -