SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21952_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
Transcript
Level		FPKM:11.15 TPM:4.98
ORF EntryO_BomaMSG11335_complete:A_BomaMSG_c21952_g1_i2
Sequence
(Nucleotide)
TCAGACGTGGGCTCTTCCGATCTCAGAAACACGAGGAACTAGCGCGCTGCCTGCAGAGGG
AGCTAGTGCGGGCTCGTCTACACGCAGCGGAACGCGAGGCCGCCGAACGCGAACTGACGG
CTCGCATCGACGAACTCGAGAACGAGAACAAGAGCCTCAGGAGACAGCGCGTCGACAACA
ATGTCGCACACTTACAGGACGAGCTGATAGCCGTAAAGTTGCGCGAAGCTGAAGCTAATC
TCTCGTTGAAGGACTTAAGGCAGCGGGTCTCGGAGCTGTCGGAATCGTGGCAACGACATT
TGCAGGAGCACAAGCAGGAAGCACCCGCTGCTCCAGTTCAGTCGAATGTAGTATCAGACA
TCATGGCGACCCCGAAGAAACTGCTGCGAGCTTGGGAAGGGAGGTCGGCTGATATGCTCA
AACTGGACGAGGAACTCATGACCACCAGGATCAGGGAGGTCGAGGCCTTGACCGAATTAA
AGGAGTTAAGACTGAAGGTAATGGAACTAGAGACTCAAGTTCAGGTGTCGACGAATCAGC
TCCGAAGACAGGACGAGGAAGCTCGGCTGTTACGCGAGAATCTAGATGCGGCGCTCCAAC
GTGAACGAGCTCTCCAAACGAGGCAGAGAGAGTTCCAGCACAAATACGCTGATTTAGAGA
GCAAGGCCAAGTATGAAGCGATGCAAGCTAACATTCGAAACATGGAAGACGCGCAAAGAA
TAGCCGAACTGGAGACAGAAGTGTCTGAATATAAATTAAAGAATGAAGTCATGGCAACCG
AAGGTGAACTAAGGAACAACAATATGGACGACTCCGACAGAGTACGTGAATTGCAAGAGC
AAGTCGCCGAGCTAAAAGCGGAGATCATGAGGTTAGAGGCGTGGAAATCTCGGGCTCTCG
GCCACACGGAGCTCAGCCGCGCCATATCCCTGGAGGACGATTTGGAAGAAGACGAGAAAC
TCAAGTTGACACTGCGCCGAGAATCTTCTACATCATTAGAATTTACAACAACCTCACGCA
AACCTTCGTAGCGAATACTCAGCACAGCCCTAAGACGACCAGATCGGTATATATTTTTTG
CTCTTTCCATTGACTTAATATTAGAAACGGTCGCATCTGGTATTTAAATGAAGGCCTCAA
TCGTGGTCTTTCGTTTATGTTATATACACACAAAAGTAAGAAACGCATATGACAACATAA
TATGAACCGAAGCTTTTTACGACATGAGCGCCCACGATTCGTTGATTATTTAAATAATAA
GATAAGACCGAATGCACTTTTTATACTACAAAAAAATTTATCAATACTGTGATATATTAT
TACCGTGGTTTCAGTTCTGGTATATTTAATCAACATTTCTGCTGCTTTTGTTTAAGAATT
ATACATTTTTATCTAAGATCC
(1401 bp)

- SilkBase 1999-2023 -