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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21942_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		tetratricopeptide_repeat_protein_5_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901796 P regulation of signal transduction by p53 class mediator
Transcript
Level		FPKM:2.46 TPM:1.10
ORF EntryO_BomaMSG11304_complete:A_BomaMSG_c21942_g1_i3
Sequence
(Nucleotide)
AGCATCGAGAGCCCAGTTCTTGTACCTTAAAGGACGTTGCTATAATATTAGTCCAACATA
TGATGCAAGAGCAACACATTGCCTCAGCAAAGCAGTAAAGTGGAATCCTCACATGGTGGA
TGCTTGGAATGAACTTGGCGAATGTTATTGGAAGAATATGAATGTTAAAGAGGCTAAAGC
CAGCTTTGAAGCTGCTTTGAAACATGAAAGGAATCGACTCTCACTACGTTGTCTGTCAAT
CATTTTGAGACAAGAAGGTGGTGACAGAAAACGTTCTGATTCCACCAATGCGATTGGCAC
AAGTGTTGAACTTGCAAAGGAGGCTGTATCTCAGGACACAAAAGACGGTATATCATGGAC
GGTATTAGGGAATGCTTTATTATGCCAGTTCTTCATGGTCTCCCAAGATCCAGCAATTCT
GAAATTATGCATGACAGCATATAGGCAAGCTTGGGCTGATCCTGTTGCTAAGGGGCAGCC
AGATTTGTACTACAATAAAGCTATTGCCTTGAAATATGACGAAATATACGATGAAGCATT
AGAAAACTTTGAATATGCGTGTCGTTTGGATCCCCCGTGGGAACCACCGCAGTTGGAACT
CCAAAAGTTAAAACAATATTTAAACGAAACAAATGAATTAGTACGAACTAAAGGAAAGAT
TAAAGTTAAGAAGCTGACACAGATGGTACAGTCGATAGACGAGAAGATGCTAGGAATATA
CAGCCCAGAAGGTTTGCACACATTCGGTGGTCGTCGCAACGTGACCCTAGAGCTGTGTCG
GTTGGAAGACTTGCACGAGGGACTCAATGAAGGAAAAGTCATATTAGGAAGAGTCGTTGG
CTCCATTCACAATGAAAATGCTGTGCCTTTTTCGTTCGCAATCGTTGGTCAGGGCATGCA
GTGCGCCTGCGTCACCGTCTACAACTGGGCCTCGGGTCGGGGAGCCATCATTGGAGACTG
CGTGACTATACCGGAACCAGTACTGACCGTACACAAACACGCATCCGAATTGGCCAGCTA
CGAGTTCAAGTCGATCCGCGTCAACAACCCGACGCTGCTGCTGGTGAACGGCAGGCGCGT
CGGGCGCGAGCAGTTCGCGAGCACGCGCGTCACCAGCACCTACGAGCTGCACTGACGGCT
GCACGCGGCCGGCGGCGGACGCCCCCTGCTCTAGTCCGCCGCGCCGGCTCCACTACCACA
CACCACTCCCACGCACCAATACGATACGAGGATAACGTCGACGGGTGAGAGGGTAGTTGA
ATTTTAAGCGACATTTTTTTGCAATTTCACAAGAGAAGAGAAAGGGAGATAGAGAGAGAA
AGAGAGAATCTATATCGACGGGCAAAAGGCTATTTAATTTAAGCGACATTTTTGCAATTT
CATAAGAGAGCCATTTAGAGAGAGAGGAGAGATCGGAAGAGCGT
(1424 bp)

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