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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21942_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		tetratricopeptide_repeat_protein_5_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901796 P regulation of signal transduction by p53 class mediator
Transcript
Level		FPKM:0.60 TPM:0.27
ORF EntryO_BomaMSG11301_complete:A_BomaMSG_c21942_g1_i1
Sequence
(Nucleotide)
CAGATCGGAAGAGAAAAGACGGTATATCATGGACGGTATTAGGGAATGCTTTATTATGCC
AGTTCTTCATGGTCTCCCAAGATCCAGCAATTCTGAAATTATGCATGACAGCATATAGGC
AAGCTTGGGCTGATCCTGTTGCTAAGGGGCAGCCAGATTTGTACTACAATAAAGCTATTG
CCTTGAAATATGACGAAATATACGATGAAGCATTAGAAAACTTTGAATATGCGTGTCGTT
TGGATCCCCCGTGGGAACCACCGCAGTTGGAACTCCAAAAGTTAAAACAATATTTAAACG
AAACAAATGAATTAGTACGAACTAAAGGAAAGATTAAAGTTAAGAAGCTGACACAGATGG
TACAGTCGATAGACGAGAAGATGCTAGGAATATACAGCCCAGAAGGTTTGCACACATTCG
GTGGTCGTCGCAACGTGACCCTAGAGCTGTGTCGGTTGGAAGACTTGCACGAGGGACTCA
ATGAAGGAAAAGTCATATTAGGAAGAGTCGTTGGCTCCATTCACAATGAAAATGCTGTGC
CTTTTTCGTTCGCAATCGTTGGTCAGGGCATGCAGTGCGCCTGCGTCACCGTCTACAACT
GGGCCTCGGGTCGGGGAGCCATCATTGGAGACTGCGTGACTATACCGGAACCAGTACTGA
CCGTACACAAACACGCATCCGAATTGGCCAGCTACGAGTTCAAGTCGATCCGCGTCAACA
ACCCGACGCTGCTGCTGGTGAACGGCAGGCGCGTCGGGCGCGAGCAGTTCGCGAGCACGC
GCGTCACCAGCACCTACGAGCTGCACTGACGGCTGCACGCGGCCGGCGGCGGACGCCCCC
TGCTCTAGTCCGCCGCGCCGGCTCCACTACCACACACCACTCCCACGCACCAATACGATA
CGAGGATAACGTCGACGGGTGAGAGGGTAGTTGAATTTTAAGCGACATTTTTTTGCAATT
TCACAAGAGAAGAGAAAGGGAGATAGAGAGAGAAAGAGAGAATCTATATCGACGGGCAAA
AGGCTATTTAATTTAAGCGACATTTTTGCAATTTCATAAGAGAGCCATTTAGAGAGAGAG
GAGAGATCGGAAGAGCGT
(1098 bp)

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