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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21867_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		probable_RNA_helicase_armi,_partial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000578 P embryonic axis specification
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007318 P pole plasm protein localization
GO:0007616 P long-term memory
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031023 P microtubule organizing center organization
GO:0031047 P gene silencing by RNA
GO:0032508 P DNA duplex unwinding
GO:0043025 C neuronal cell body
GO:0043186 C P granule
GO:0045202 C synapse
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
GO:0070725 C Yb body
GO:2000002 P negative regulation of DNA damage checkpoint
Transcript
Level		FPKM:3.33 TPM:1.49
ORF EntryO_BomaMSG11157_internal:A_BomaMSG_c21867_g2_i1
Sequence
(Nucleotide)
GTAGGACAATGTTTAGAAGGGCCCACCAAACAATAAATTTCGCAATTACCAAATTGGGTC
CTGATGTCTTATTTCCTTCTCGTGTTTCTACTCATTCTTGTCTGCTTAGTCAAAAAAGGC
TAAGCACACTCAAATGGTTCAAGAAAAATTTGAATGATTACCAAAAGTCTGCCGTTTTAA
ACATCCTACAGGGAGAATGTCGTCCGCTACCTTACTGCATATATGGACCTCCAGGAACTG
GAAAAACTGTTACTGTAACAGAATTAATTCTACAAATATTGACACAGTTTCCTGATAGCA
GAATTCTAGTAGCCACTCCTTCTAATAGTGCCGCTAACCTCATCACTGAAAAAGTTATTG
AATACAGAGAAATGTTTTCGGATTCAATTTTGAGGTTGATAGCACATCACCTCGTAAATT
CTGATAATCTTCCAGAATCAATAAAGCCTTTTTGCTCAACTTTAGATTTATCAGCAGAAA
ATACTAAACGAAGACAAATAGAATCAGGAACAAAGTCGAGAGGCACTTCGTTTATTGGCA
GACATCGTGTCACTATTGGCACTTGCTACTGTCTCAGTGGGTTGATACAGCTAAATTTAC
CAAAGGGACATTTCACACACATTGTGGTTGACGAAGCAGGTCAGGCTACGGAACCAGAAG
TTATGATTCCTCTAATACTAGCAGATAAAGAAAGTAGTCAAATAATTCTAGCCGGCGATC
CAAAGCAGCTTGGCCCAGTTATTTTGTCGAAATATTGCAAAGAACTGGGCTTGGATGAGT
CATATTTATCTAGAATTCTGGAAATGTTTCCGTACCAAAAAGATTACGACGCTTATAATT
TAACAGATGGATTTAACCCGAGACTTGTGACAAAATTAAATCACAACTATAGATCATTAC
AAGAAGTTTTGCAGTTGCCAAGTGCGATGTTTTATGAAGCTTCTTTAGTTGCTAAACTTG
ATAGAACTTCACCATGGGTAACGAAACTACTAAAAGTAGTCTCGTTAATATTTCAAACAC
CGGATTCTGAATCGGGAGGTATATTCATGTATGGCATCAGAGGTTGTAACGCTAGAGCTG
AAGACAGTCCATCATGGTACAACCCACAAGAAGCTTCAATGGTGGCACTGACCGTCTGCA
AACTATATAAAAAAGATATTAAACCTGACGATCTTGGGATAATAACACCTTACATAGCAC
AAATTAAATGTATACGCCTGTTATTTGACGCGATGGGATTGCCGCAGCCTAAAATAGGAA
CCGTGGAAGAGTTTCAAGGGCAAGAGAGACCTATTATTTTAATATCAACTGTGAGATCTT
CGGAATCGCATTTACAAGAAGA
(1342 bp)

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