SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21766_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		basigin_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005537 F mannose binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0006090 P pyruvate metabolic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007566 P embryo implantation
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030246 F carbohydrate binding
GO:0042383 C sarcolemma
GO:0042470 C melanosome
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0043434 P response to peptide hormone
GO:0045121 C membrane raft
GO:0046689 P response to mercury ion
GO:0046697 P decidualization
GO:0050900 P leukocyte migration
GO:0051591 P response to cAMP
GO:0070062 C extracellular exosome
GO:0072661 P protein localization to plasma membrane
Transcript
Level		FPKM:40.47 TPM:18.08
ORF EntryO_BomaMSG10966_complete:A_BomaMSG_c21766_g1_i1
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTTGTTACTTGACTTCTTTAATGTGTAAAGTGGTTTTAGAAAAT
AAGTAATTACTTTTATGCTCTAAAGTCGGGAGTAAAGACGGGCCTACACCTTAGATGAAA
GTGAAAATAGTGAAAAACATAACTATGCGATCTCAATTGTGTTTGCCTTTATCTCTTCTA
TTTTTAGCCTGCGGAGTTCTTACGAGTGCCCAAAACTCGTCAACTATTGCTCCGGTCACC
GAGCCCACCCAAGAACTGGTCAATTATGAGGCCTTGAAGTACATCGTTGGACGCCCGTTC
AATTTGAATTGCACTCTCGCCGTGCCACTGGATTCGTTTGAGATCGTATGGAAGAAGAAC
AGCGTGCCTCTCGGCGAGGTGGCCGGCCTCAAGGAGCGGTACGAGCTCCAGAACAAGGGG
CTCACCTTCCAGATCAAGGGCCGCAGTAACGAGGACGACTACGGCAACTACACGTGCGGC
CTCAAGAACCAAACGGGACATATCAAAGCCTGGATGGTCACGGGAAACGTGCACGCCAAG
ATGACCAAGGACGCCAACGTGGTCGAGGGACAGAACATTAAGATCACTTGCAAGCTGATC
GGCAAGCCGTACTCTGAGGTGACGTGGAAGTACAAGAAGGACGAGTTGGACAACGGCACG
GACGTGAGCGCGGTGCTGGGCAGTCGCGTGCAGCTGGAGAAGAACGAGCAGGGGCTGGAC
AACACCGTGCTGGTGCTGCACAACGCGGAGCGCGCCGACGCCGGCCTGTACCAGTGCAGC
CCGGCCGGGGGCACGCCCGCCGACGTCACGCTCAGGGTCAAGGGCGTGTACGACGCGCTG
TGGCCCTTCCTCGGCATCTGCGCGGAGGTCGTGGTGCTCTGCGCCGTCATACTCTTCTAC
GAGAAGAGGAGGACCAAGCCCGAGCTCGACGACTCCGACACCGACAACCACGACCAGAAG
AAGTCGTAGGCGCCCGCGCGCTCCGTGCGACGCCGCTGCCCCCACGCTGTGTTCGTACAC
AAAACTACAATCATATTCTATATTCGCCTTTTAATTCTATTATTTCACAATAAAAAAACG
CTGTATGTATTTTTTGAATACGCTCTGTAGTATAGTCTAAAATGAAATGTATTAAAAATT
ATGTAGAAGATTAATCTTTAGTAACATTTACTACTACCCTATGGTACTTATCTATAACAC
CGTTATCTATGTAAATTATATATTGTCACTGCTATTGACCGCCCTCTGTAAATGACTAAT
AACGTTACCTATGTTCAGGTACAGCGTTGGTTACGATAACACCACTTATTATTAGAGGAT
AACTTTTTCATTCGCACGTAGGCAGAGAATGAGATGTATTTTATTCTTCACGTGAAATCG
AAAATTCTTCAGTTTGCTTCTGGATACTATATACTTTTCTCCTATATAACTAAACGCCTT
ATATCTATAAAAATTCGAGTAAAAAATTAACAGCTGAAAGCTTAACGAAAATAAATATGT
AAAAAAAACTAATATTATTATTATATTGTATAATAGTACATAATATTATATGAAAAATTA
TCGTGTATTGTAATAAAAATCTAAGTGAATGATCGCTTTGGTGCGTTGACAGTTCGAGTC
TAAATCATTTGAGGTGCCTTTGCTCGATAATTTGTTATAATAGCGGCTTATTCACCGTAA
AATTAAATAAAACCACTACACTGGGCTGGTTGGTTTGAAGTCCGCCTTATTGAGCAGTAA
GTCAACTCCGGCTCAAAGGCCGAGTAACTGATGGCCGTAAAGAAACTTAAAAATTTATTC
TTTTGCGTTCTGCACGTGTACTTAAGTCGAAATGCTTACGTAAAAAAAGCTGTCTGCGTC
GAAGTGAATCAGCTCAGTCAGATTTAATTATTTCATAAACTATTAATCCTTTTTGTATAC
CAAAAATAAAGATATTGCCATGTCTACTGCCGACACCCAATATATTAACCATTGACGTTA
ACAAAACCCTATTTATACATACAACCTTTATATTTATTTTTGGTAATCAAAACGTCTTGT
TTATTTTTTTAAATAATATTTTGTTATTTTTTTTTCTAACCAAGTCATGTAAATACATTT
TTACAATATGAGTCTACTAGTTAAGGAGGCTCATTGACGATTGTTGCTATGTGAAAACAG
AAAGAATTTTATTGAAATTTTGTTTTAATGTATAAGTACAATATATTAATGTATAAATCT
GCGTTTAATTTCCACGTTGAATGCTACTCTCACATTCAATTGTATGTCGTAAGTATTTGA
TATAGAGAACGTAATGAAATATATTATGTACAAATCGTACTAATTAGCTGTCCGAACAAG
GGGATTGCTGTTGAACTACCGACCCAACGCCATCTGTCGGACGGCCACGGTACTGTGCCG
GGAACCCCCTAACCATTGAGTAATAACTGATGTTGCCGCTTCGATAACTTCCACGCGTTT
GTTCGACAGCCATTGTTCACTGAGAACTGCAGTCACGTAGAGGTTGTTTGTTTGTAAATC
GGAATAATTACTAACAGTATAAACCGAATAATAAAGTTTTTGTTGAAAAAAAAAAAAAAA
AAA
(2583 bp)

- SilkBase 1999-2023 -