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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21764_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		splicing_factor_3A_subunit_2_[Bombyx_mori]
Ontology
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0010976 P positive regulation of neuron projection development
GO:0016607 C nuclear speck
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.90 TPM:0.40
ORF EntryO_BomaMSG10963_complete:A_BomaMSG_c21764_g1_i2
Sequence
(Nucleotide)
GTTAGTTATAACTTCAACATGTTAACCTCGTTCACTTCACAAACGTAAACTTCATTTTTA
GGGTCCTATGAATGTAAACTTTGTTTAACCCTGCATAACAATGAGGGAAGTTATTTGGCT
CACACGCAAGGGAAGAAACATCAAGCCAATTTGGCACGTAGAGCTGCAAAGGAAGCCAAA
GAAGCGCCTCAACAGCTTGCCCCGGAAAAACCTAGAATTGAACCTAAGAAATTTGTGAAG
ATAGGTAGACCTGGTTACAGAGTAACAAAACAGAAAGATCCTGAAACTGGACAGCAGAGC
TTGCTCTTCCAAGTAGATTATCCAGAGATTGCAGAGGGTGTTATACCTAGACATAGATTT
ATGTCTGCTTATGAACAGAAGATTGAGCCTCCAGACCGCAGATGGCAGTATTTGTTGTTT
GCAGCAGAGCCTTATGAAACTATTGCATTTAAAGTCCCTAGCAGAGAAGTTGAAAAGCAT
GATTCAAAATTCTGGACTCATTGGAACAAGGACACAAAGCAGTTCTTTTTGCAATTTGCA
TTTAAGATGGATCAGTTACGCATGCCTCCCCCCCATCCCAAAATGTGGGAGGGTCATAGC
ATGAGGTTGCCTCCACCTCCTGGAGCACCGATGTTGGGAGTACCACCGCCACCACCATTA
TTACCAGTGCCCCCACCACCACCCTCTATGTAATTAGTTGATATTTTTCCAATAAAGTTT
TTGACATACAAAAAAAAAA
(739 bp)

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