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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21764_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		splicing_factor_3A_subunit_2_[Bombyx_mori]
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0010976 P positive regulation of neuron projection development
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.49 TPM:2.90
ORF EntryO_BomaMSG10961_complete:A_BomaMSG_c21764_g1_i1
Sequence
(Nucleotide)
CAGGTCATAAAATCCCTTAAAAAAAATCAATTCATGTCATCAAATGTCATGTTAGGTTAC
AAGGTTAGGTTTGTAGATTAATTACAGAGCAGATTACAAATTTCAATTTAATTTAATGTC
AATGTTTAACTACTTTGTCAACTGGACAATTAATATTTTAAGCTTAAAATAAGTGTTACT
TTTAATTAAAATGGATTTTCAAAATCGCCCTGGCGGTAAAACTGGTGGAGGAGGTGTAGC
GTCATGGTCGGAAAGTAACAGAGACCGGCGGGAGAGATTACGACAGCTTGCACTAGAAAC
AATAGATTTAAACAAAGATCCATATTTTATGAAAAATCATTTAGGGTCCTATGAATGTAA
ACTTTGTTTAACCCTGCATAACAATGAGGGAAGTTATTTGGCTCACACGCAAGGGAAGAA
ACATCAAGCCAATTTGGCACGTAGAGCTGCAAAGGAAGCCAAAGAAGCGCCTCAACAGCT
TGCCCCGGAAAAACCTAGAATTGAACCTAAGAAATTTGTGAAGATAGGTAGACCTGGTTA
CAGAGTAACAAAACAGAAAGATCCTGAAACTGGACAGCAGAGCTTGCTCTTCCAAGTAGA
TTATCCAGAGATTGCAGAGGGTGTTATACCTAGACATAGATTTATGTCTGCTTATGAACA
GAAGATTGAGCCTCCAGACCGCAGATGGCAGTATTTGTTGTTTGCAGCAGAGCCTTATGA
AACTATTGCATTTAAAGTCCCTAGCAGAGAAGTTGAAAAGCATGATTCAAAATTCTGGAC
TCATTGGAACAAGGACACAAAGCAGTTCTTTTTGCAATTTGCATTTAAGATGGATCAGTT
ACGCATGCCTCCCCCCCATCCCAAAATGTGGGAGGGTCATAGCATGAGGTTGCCTCCACC
TCCTGGAGCACCGATGTTGGGAGTACCACCGCCACCACCATTATTACCAGTGCCCCCACC
ACCACCCTCTATGTAATTAGTTGATATTTTTCCAATAAAGTTTTTGACATACAAAAAAAA
AA
(1022 bp)

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