SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21752_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		nucleosome-remodeling_factor_subunit_NURF301_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
Transcript
Level		FPKM:4.48 TPM:2.00
ORF EntryO_BomaMSG10946_5prime_partial:A_BomaMSG_c21752_g1_i2
Sequence
(Nucleotide)
GAACCACGTCCGCCGGCTCCGCGGTCGCCGTCACCGCCTGCACGGCGCCGGGCTACTTCC
CGCCACGACGACGACGAAGAGTGGGTGGAAAGCAGCCCGCGGAAACGGACGCGGGCGTCG
CGAGCTCTGTCCCCGGCGCCACCCGAGCCGCCGCGCACCGTGTCCGCACCTGCACCCGCG
TCTGTGCCGGCCCCTGTACTAACGTCTGTACCGACGCCTGTACCCGCCTCCGTACCAGCG
GCTGTGCCCGCGCCGGTCTCCACGCACCTCGATGAACGACGCCGGACCGCCACCAACAAC
TCTCGACTTCAAATGCTTCTATTTAAGCACAAGGAATTGCTAAAAAAAGACATTATAAAG
AAAAGAGGTTTACTCGAAAAAGAACTTGGAATCGAAATACAGAAAGAACTATCGGCTGAA
TTGGCGTTGCGTACGCGGGCCGAACGCAACAAACAAGAAGAAGTGCGCGCTAAAAGACGT
GCCACTGTTACGCCTTCAACACCTAAGCAGACCAAACGAACTAATAAAAAAGAAAAATTA
CTTTGTATCTGCCGTACACCTTATGATAATACGAAGTTTTACGTAGGATGCGAACACTGC
AGTAATTGGTTCCACGGTGACTGTGTCGGTGTTACTGAAGAAATGAGTAAAACTATGGAG
GAATATGTTTGTCAAGACTGTAGACGTGCTGAAGAAACACAAGAGCTTTACTGTCTCTGT
AGACAACCCTACGATAATTCACAATTTTACATATGTTGTGATCGGTGTCAAGATTGGTTT
CATGGCAGATGCGTCGGTATTCTACAGTCCGAAGCCGACAATATCGATGAATATATTTGT
CCGAATTGTCAGAAAAACAATTCTGTCAATTTCGCAAACATGAAGGAGTTAACTCACAAG
GATTTTGAAAATTTGAAGAGGCTAATAAAACAAATCCAATTACATAAAAGCGCTTGGCCT
TTCATGGAACCTGTGGATCCTAGAGAAGCACCAACGTATTATAAAATTATCAAAGAACCA
ATGGATTTGCAAACAGTGGAACGAAAAGTGAATGAACAAACATATAGTATGTTAAGTGAA
TTTATTGGTGATATGACTAAAATATTTGATAACTGTCGATATTTTAATCCAAAGGATTCT
GAATTTTATCGATGTGCCGACGGATTAGAAGCATTTTTTGCACAAAAAATCAAGTATTTT
CGTGAAAAACTATTTGAAGCTAATCAATGATACGAGTGAAATCGTGATGTGACGAAAAAT
TATTTTAGGGCATAGTGTGCACAAACTGTGCAGACTTGAGGACTGCAAACAAAATTGACT
CGCTGTTTCTTAAAATGATCTGCCTGTAAATTGTAAAGAATGTGATGAAATTTACAAAGA
ATTATAAATAATCACCTGCAAGAGTATGTCAGTTATGTCTATAAATATTTATTGTAATTA
TTACATGCTTCAATACGTC
(1459 bp)

- SilkBase 1999-2023 -