SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21734_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_2_-_cabbage_looper_transposon_TED_(fragment)
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.42 TPM:0.19
ORF EntryO_BomaMSG10922_5prime_partial:A_BomaMSG_c21734_g1_i2
Sequence
(Nucleotide)
GATCGGAAGAGCGACACCGACACCACCTGTAAAGATACCACCTATGTTTCCGGTAGCAAT
GCCGAAACCGCTTTCATTCGGACCGAACCCAGGACCGAGCTGGGAGCGACAGCCACCACC
AGGACCTAATAACCATTGGAAACCTGCTTTCAAATTTAACGCCCCTCAGCGCATGCCTAA
CATGCCATCACGCACGCAGCAAATGTTCGCATCGCACCCACCAAACTACAACCCCCGTAG
CAACGTATTTAGGCTACCTCAGCGGAACCAGGGACCGAAACCTATGAGTGGTATTAGTCA
CTACGTGGCAAAACAACTTCCACTCACAGGTCATGATTGGAGTAAGTCAGGTAACCCACC
TCCAACAAATTATTTTAAAACAAGAGAGATGAACATTAACGAATGCTACAATAGTGACGG
TTATTACTACCCCGACAATGACTACTATACCCACGACTATGACCGTAACTATTATACAGA
TTACACTAACTATGACGCGGACTATAATAACTATGAAATATACGAATATTACGACCCTAC
AATAAATGACTGCCCACCAAACGGAAATAAAGTTAACGAAATAAGTAGTATAGGAGCCGA
AGCGCAACCCTCTACTAGTCATTCGGATCAGGATTTTCCCGTGAGCCCCCCATTAAAACT
GTTAAAATAGAATTAAATTTACAAACTCAACGCCAGTTACCGTACTTAAAAATTAAAAAT
CCACCTCTAAACATATTAATCGACACGGGCGCAAATCAATCTTTTTTAAGCCCGAAAGCG
GTAGAAAAATTCTATGCAAATATACCTCTTAAATATGACCCCTTCGAAGTAACGAACGTC
CACGCTACAACTAGGAACGACTTTTCTATCACTATACCAGCTTTTTCAGAATTTAACGAC
GCGGGACCTATTAAACTGTTTGTCTACGATTTCCACAATTTTTTTGACGGACTTATTGGT
TTAGACTTGCTGACTAAATGGAAATCTAGAATCGACCTTAAAGACAACTTACTGATTACA
GACAATTCTACCAACCCTATTGAAATGTTCAATTCTCGCAACGTCAACCTGTACGAAGAC
ATCGTACCGGCTAACTCTAGTAAGCTAGTTAGAATTCCAATAAATTCATCTGACGGC
(1137 bp)

- SilkBase 1999-2023 -