SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21684_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		catenin_alpha_isoform_X1_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007293 P germarium-derived egg chamber formation
GO:0008092 F cytoskeletal protein binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016342 C catenin complex
GO:0030054 C cell junction
GO:0030055 C cell-substrate junction
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0034332 P adherens junction organization
GO:0045296 F cadherin binding
GO:0051015 F actin filament binding
GO:0060323 P head morphogenesis
GO:0060429 P epithelium development
Transcript
Level		FPKM:4.83 TPM:2.16
ORF EntryO_BomaMSG10828_5prime_partial:A_BomaMSG_c21684_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGTTCCGTGGTGACGCAGGAGATGGACAACTATGAGCCCTGCATC
TACACCAAGCGCGTGCTGGAGGCGGTCACCGTGCTGCGGGACCAAGTCATGTCCAAGTTC
GCGGTGCGCGTCGACGCGGCCGTGTCGGCGCTGGGAGGCGGCGCCGGCGGAGCCCTAGAC
GAGAACGACTTCATAGACGCGTCTAGACTCGTCTATGACGCCGTCCGGGAGATACGCCGG
GCGGTGCTCATGAACCGGACCAGTGACGATTTGGACACGGACACAGAGTTTGAGCCGGTC
GAGGACATGACAATGGAGACGAGGAGCCGATCGAGCGCTCACACGGGCGAGCACGGAGTC
GACGAGTACCCGGACATTAGCGGCATCACTAACGCCAGGGAAGCGATGCGTAAAATGACC
GAAGAGGACAAGAGGAAGATCCTGCAGCAAGTCGAGCTGTTCAGGCGCGAGAAGATGTCG
TTCGACAACGAGGTCGCCAAGTGGGACGACGCCGGCAACGACATCATCATGCTCGCCAAG
CACATGTGCATGATCATGCTCGAGATGACAGACTTCACGAGAGGTCGCGGCCCCCTCAAA
ACCACCATGGACGTAATCAACGCCGCCAAGAAGATATCCGAAGCCGGAACCAAACTGGAT
AAGCTGACCAGGGAGATCGCCGAACAGTGTCCCGAATCCTCTACTAAACAAGACTTGCTC
GCCTACCTCCAACGGATCGCTCTGTACTGCCACCAGATACAAATAACCAGCAAGGTGAAG
GCGGACGTGCAGAACATATCAGGAGAGCTCATCGTGAGCGGGCTGGACAGCGCGACGTCC
CTGATCCAGGCGGCCAAGAACCTGATGAATGCGGTCGTGCTCACCGTGAAGGCTTCGTAC
GTCGCCTCCACCAAGTACACCCGCCAGGGGACCATCGCGTCTCCGATAGTGGTTTGGCGC
ATGAAGGCCCCCGAGAAGAAGCCCCTCATCAGGCCCGAGAAGCCGGAGGAGGTGAGGGCG
AAGGTCCGCCGCGGCAGCCAGAAGAAGCAACCAAGCCCGAT
(1061 bp)

- SilkBase 1999-2023 -