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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21665_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:26.04 TPM:11.64
ORF EntryO_BomaMSG10798_3prime_partial:A_BomaMSG_c21665_g1_i1
Sequence
(Nucleotide)
CTTGAAACGCAATCTTTTATGTCTATGGTTCGCGTCGTTCTTTGGGCTCGCAAGATTGCG
AGTAAATTTATTTCAATTTATAGTTTTAGGTCTTTTTGACCTTTTTTTTTTCATGGCTGC
GTAAAAACGCGGTTGAAAGTGCAGATTGTTCCAAACATGAGTGATTATTCTTCTATGGCT
ACGCTCCAAAATAATAGTCAAACGGCGGGATACGCGACTGCTGTACAACGTGCGAGACAG
GTAGCTGCTAAGATTGGTGGTGGTAGCAAGAGGCCATTGGAAGACGGACCAGAACCAACA
CCAAAGAAATTAGCACCAGTTGAGCCGGTTTATACACCACAACCTCCAGTTATGAATTTT
GTTGACAGTGTATCGCCAGTTGCGGTTGGTGGTGGCGGACGTATGATAGCAGGTGCGGGC
CCTGGCAGTGGACCAACAAATTTATTGCCTGATCAGAGCATCAATGAATACATCAGAGTA
CCTGATCGTATGGTTGGACTAATAATTGGACGTGGTGGAGAACAAATCACCAGACTGCAA
GCAGAATCCGGTTGCAAGATACAAATGGCACCACCCACTGATGGAAATCCTGATAGGCTA
TGCACGCTTACTGGTTCTAGAGATGCTATACAGAGAGCTAAAGAATTAGTGAACCAAATT
GTGAATCATCGAGGAAGGGAGAACGCTCCACAACATCAAGACCCTTCAGAACCTGGAATG
AACATGGGCAGGCCAGGCCCTAATGCAATGGAAGAGATCATGATCCCCGGCGCTAAAGTT
GGCCTGATCATTGGCAAGAATGGCAAAACAATAAAACAACTCCAAGAACAAACTGGAGCC
AAGATGGTCGTAATACAGGATGGACCTAATGAAAATTCATTTAAACCGCAGGAGAAGCCT
TTGCGTATATCCGGCGATCCGGCCAAGGTTGAGCACGCGAAGCAGCTCGTGTTCGAGCTC
CTCGCCAACAAGGACATGCAGGAGCCGCCGCGCCCCTACGACGACGGCTACGGCGGCTCC
GACCCCGGGAACGGACTCGCCACCACTTCCGCTGAGGTTTTAGTCCCAAAAGTGGCTATT
GGTGTTGTAATCGGCCATAAGGGTAAAATGATAAAGAAGATACAAGCGGACACCGGATGT
AGGGTCCAGTTCAATCAAGAGCATGATGAGGAACCAGGGGATAAACTATGCTACTTGCAG
GGGAAACCCCATCAGCTAGATCAAGCTCGTCAGATGATCGAAGATCTTATATCTAGTGTC
AAAAGATGTGAGGAGGACAGTCGGAGCCGTGCAGTACGCGGCCAGGGCCAGCAGAACGGC
GACAGGGGTGGCATGGAGTACGGGCAGCAGTGGCCCGACCGACCAGAGATGCGCGTCACC
TTCACCATCCACGGACCCAAGTGCGGCCTGGTCATTGGCAGAGGTGGTGAAATCATAAAG
CAAATAAACGCTCAGTCCGGAGCCCACTGCGAACTAGACAGGAGATGCCAGAGTAATGAC
AGGAACACAAGGACGTTTATAATCAGAGGACACCCAGAAGCAGTTGAGACTTGTAAACGA
ATTATCATGGAGAAAGTTGGTGGGCCTGTCAACTTTATCCCGGAAGGCAACGGTAACGGC
AACGGCAACGGTAACGGGTCCGGCAGCGGCGGCGGCACCCCCGGCCCCGAGTACTACACG
GGCGGCACCCCCGCCGCCTGGGGGTACAACCCGCACTGGCACCAGCCGGCCGCCTCGCAG
GGACCGCAGCAACAAGTATCAATAAACCCAGCGACGGGTCAACTGGATTATTCACAACAA
TGGATCGACTACTACCGCTCTGTGGGCCTTGTCCGGGAGGCCGAAGCCATCGAACAGGCT
AAAATGCAGCAGCAGCAGCAGCAACAACAA
(1890 bp)

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