SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21642_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
Transcript
Level		FPKM:3.83 TPM:1.71
ORF EntryO_BomaMSG10760_internal:A_BomaMSG_c21642_g1_i2
Sequence
(Nucleotide)
GTTGTTTCAAAAGAAAGGGCTGATGCTGTATTTGACACGTTGAAACATGCTTTTGGACCT
AATAGTTGTTTTATGCTTCCCATTAATTCTAAAAGTACGTCAGATGCTAATGTACCTGCA
GATTTATGGAGCCAGTATATTAAGAGATCTCCAGATTCCACCAGTGACGTAGCTTCTACC
CTCTCGAATTTAGCAACAACGCCAGCAGAACAAGCCCCTATATTTCCATCTCAAAACATT
GAAAGAGGTGAAGACACATTAACAGGGTCAGTACAAGAGAGTGTGCACCCACTGACAAGC
CCAGAAACAGATGTTTATGACAATGCCAACAGTTTGCAGACCCATTCGTTTTCTGGCAGT
GTAGAGAGTGTTAGCGTCAGCGCAAAAGGAATTGATTTGTCTACTGAAGTTCATGGGGCT
GCTTTAAACAACAACGATATAGAGGCCATCAAAAAATTCCTTCAAGAATATGCATCAAAA
GCCTTGCTGCCGTACATAGAAAAGCAAATCTCCCAGCTATCTGAATCAGTAGCCAACAGA
AAAGGAGTAAGTAGATCGCTTCTCTCTGCTACAAAAAGATGGTTCGGCACTGGTAAAGGT
GGAAATGCTACCGGAAATAGTGCAGTTGTATACACAAATGACTGTCCCGAACTACAGTTA
CGACGTTTGGGCGATCTTTGGTTTTTGTGCGGGCAATGGCAGCGG
(705 bp)

- SilkBase 1999-2023 -