SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
NameA_BomaMSG_c21603_g1_i1
Scaffold_id
NCBI non-redundant
(nr)
pre-mRNA-processing_factor_40_homolog_A_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0008150 P biological_process
GO:0071004 C U2-type prespliceosome
Transcript
Level
FPKM:5.17 TPM:2.31
ORF EntryO_BomaMSG10701_3prime_partial:A_BomaMSG_c21603_g1_i1
Sequence
(Nucleotide)
GTTGTGTACAAGAGGTCCCACCTTGCGTTTTATTAATTTGAACTACTACCATTACATACA
TTACAATAATTCATTTTGTGCCTTTCCAACTATAATAACATTTTGTTGCCGACAGTTTAC
GATTTATTAAGTCTAGTTCTTACTTAAAAAAAAATAATTAAAAAGCGACAGTATTTGGTA
GCCCAGTCATGGAGCCACCCAGTGCGGGGACCAGTTCTCCGGGTCTCTTAAACGCGCCTC
CTCTTTTACCGCCTCCAATGCTAAGCGGTATGCCTCCACCAATGCCGCCCGCTGTGGCAA
TGCCACCAGTGCCTGGGCTACCTCCAAATATGGCTACATTACCACCGCCCATGGGCTTTC
CTCCCATGTTGCCGCCTCCATTTTCCATACCACCGCCAGGATTCCCTGCATTCAAACCGG
AATTAAATGCTCCTGCACCAGATGTTGCTCCATCGGCAAATCAAAGTAGTCCATGGTCTG
AACATAAGGCCCCTGATGGAAGAACATATTACTATAATTCTGTAACCAAACAAAGCTTGT
GGGAAAAACCTGACGACTTAAAAACGTCAGCTGAGAAACTATTATCTGCTTGTGTATGGA
AAGAATATACCACAAATACTGGCAGACTTTACTATCATAATATTGAGACAAAGGAGTCCA
GTTGGGTAGTACCAAAAGAATTACAGGAGATTAAAGACAAAATTGCTGCTGAAGAAGCTG
CTCAGCGCATTGTGATGGAAGTAACACCGAGTGAGGTGCCGCTGCCGGCAGAGCCTGCAG
GCTCCTCCGCCCTTGACGAAGCTATGGCTAAAACATTAGCAGCCATTGATACCTCATTGG
CCACATCCATACCTGTACCTGACGAAAAACCAGAAGACACAGTTTCAATTAATAATGAAA
CTCAAGAACAGCCGGAGATGTTGTACAAAGACAAGAAAGAGGCTATTGAAGCATTTAAAG
AACTCCTGAAAGATAAGAATATACCCTCAAATGCAACATGGGAACAATGTGTAAAAGTTA
TTTCAAAAGACCCACGATATGTCACTTTTAAAAAACTCAATGAAAAGAAACAAGCGTTCA
ATGCTTACAAAACTCAAAAATTAAAAGATGAAAGAGAGGAACAGAGACTGAAAACAAAAA
AAAATCGGGAGAATCTTGAAGAGTTTTTGTTGAGTTGCGAACGGGTGACATCTCTGACAA
AATTTTACAAATGTGAAGAAATGTTCAGCAATCTAGAGATTTGGCGATGTGTTCCAGAAG
CCGATCGTAGGGACATATTTGAAGATTGTATTTTTACTATAGCGAAACGGGAAAAAGAAG
AAGCAAAGGCTTTAAAGAAACGGAATATGAAAATGTTAACCCAGGTATTAGAGAACATGA
GCGAAATTACGTACAGTAGTACGTGGAGTGAGGCGAGATCGG
(1422 bp)

- SilkBase 1999-2023 -