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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21528_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_chromobox_protein_homolog_1_[Bombyx_mori]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000779 C condensed chromosome, centromeric region
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005719 C euchromatin
GO:0005720 C heterochromatin
GO:0005819 C spindle
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0019899 F enzyme binding
GO:0019904 F protein domain specific binding
GO:0031618 C pericentric heterochromatin
GO:0042802 F identical protein binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:1990226 F histone methyltransferase binding
Transcript
Level		FPKM:8.30 TPM:3.71
ORF EntryO_BomaMSG10599_complete:A_BomaMSG_c21528_g1_i1
Sequence
(Nucleotide)
CAAAATTTGAGTCCGCTGTGCAATTCTAGGCTTCGAAAACTTATTGGTACCTACTTTTTT
TCTATTGTGGAACACGCTTTACCATTGATTTAGACATTTATCTCATAAATAATGGATGAA
TCACTAGAAGCAGAGCTATCGTTCGCAGAAAATGCTCAACCGGCACAACCCATGGAGACT
AGTCAGACGGACAACACTTTAGCTCAACCTGGAACTGTTGTTCCCGGCGGGAAACCAGAG
GAATTTTCTGTGGAGAAAATACTTGACAGAAGGGTTAAAAACGGGAAAGTCGAATATCTA
TTAAAGTGGAAAGGGTACTCTAATGAAGACAACACTTGGGAACCAGAAGACAACCTTGAC
TGTCCTGAGCTGATATCAGCATATGAAGAAGCAAGAATGAAAAAAGAGAGAGAAGCTGCA
CAAGCTGTATCTGATATTTCAGAAGAAAACTTAGCAACCAGGAAAAGATCTAAAAGAGGA
TCCAAAAAGAAAATTGAGGAAATTGAAAAGCCTAGAGGTCTTGCCCGTGGTTTGGAACCT
GAGAAGATTTTGGCTGGCCAGCTATTCCATGGTACACTGTTTTTCTTGGTGAAATGGCGG
AATTGTCTTGAAATGGATGTTGTACCCGGACACAATTTAGGCGAAGCATTTCCGGAATTT
GTTATTGATTACTATGAGAAATGTGCACCTTTCAGTGTTAGACATAAGGACATGAAAGCT
TTTAGAGAAGCACCAGAGTTACCTTCAGATGATCCAACTAAGCCTGAAACTGAAACTCCT
ACCAAAGGGGCTGAAGACACATTAACTACTAGTGAAGCAGTTGAATCGCGAGTAGAACCT
CCGTCTTCTGTGCCAGTTGCTGAGACGGCGTCTCCAACCTTAGAAGTGCCTGTCAACTGA
ACTAAATAAAACCGACCACGACTGCCCGATAACATTACTATTCAGTTAGAACAATCCAGA
AATAATCTAATGTATTTTGTATTTTTTTAATACGCTTTTATTAGCTT
(1007 bp)

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