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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21517_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		procollagen-lysine,2-oxoglutarate_5-dioxygenase_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0008475 F procollagen-lysine 5-dioxygenase activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0030867 C rough endoplasmic reticulum membrane
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:1.54 TPM:0.69
ORF EntryO_BomaMSG10587_3prime_partial:A_BomaMSG_c21517_g1_i1
Sequence
(Nucleotide)
CACTTTTACACCAATGCCATACAACGTTCTAAAAAAGAACTAAACAATTTTACAGAATAT
ATTCATGTATGTGAGCAACGAAGAGGATTTCGGCCATCTCGTTAATCCGGAAACATATGA
CATAACAAAAACCCATCCCGATATGTACCAGCTCTTCGAGAATAATATGGAATGGACTAC
CCGTTATCTGCACCCTGAATACTTGGCTAACTTCGAAGAGGATCGGAAACATTTAATGCC
GTGCACTGATGTTTATTGGTTCCCCTTGATGTCTGATAGATTCTGTGATGAGTGGATCGC
TATAATGGAAGCATACGGAAAATGGAGCGATGGAACCAATAATGATAAACGTTTGGAAAG
CGGCTACGAAGCTGTGCCCACTCGAGATATCCACATGAGCCAAGTCGGCTTGGAACGTCA
TTGGCTACAGATCCTGAAGGATTACGTACGACCACTTCAAGAATTAGTCTTCACCGGATA
CTATCATAATCCTCCAGCGTCTATAATGAATTTTGTTGTTCGTTATCGGCCGGATGAACA
ACCGTCGCTGCGACCTCACCACGATTCCTCTACATATACCATCAACTTGGCTCTTAACAC
TCCTAACGTGGACTACGAAGGCGGTGGCTGCAGATTCATCAGGTATAATTGTTCGGTTCG
CAACACTAAGAAGGGCTGGCTCCTCATGCATCCGGGGCGTCTAACTCACTAC
(712 bp)

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