SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21473_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		zinc_finger_protein_708_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
Transcript
Level		FPKM:0.67 TPM:0.30
ORF EntryO_BomaMSG10504_5prime_partial:A_BomaMSG_c21473_g1_i1
Sequence
(Nucleotide)
AGATCGGAAGAGCGTCAACGGGGCCTACAATAGGGACGCCTCGTACTGCGTGGAGTGCGA
TAGACAATATCCAAGCGTCTACAAATACAGGAAGCATCTGAAGCAGTCGGTCAGGCATAC
CCCGAAAAAGAAAGTAAGGATACCGTGCCCTGAATGCGGGAAAGTCTTCACGCGTACGAA
CTACATGAATAATCACTACAGGCTGTTCCACTCGAAGGACACGAAGCACTATTGTCAGCT
TTGTAACAAGCTATTCGTCACCGGCTACGCGGCCAGGAAACACAAAGAATTCGTTCATGA
CAAACAAACTTTGCCCAAAAACAAGATCTGCGATATATGCGGCCGCGGCTTCAGTACGAA
CAGGATTTTAACCAATCACAGGAGGACACACACCGGAGAGAGACCGTACAAATGCCCGCA
CTGTACCGCCGCGTTCGCCCAAAGCACCGCCATGCACACGCACATGAAATCGCAACACAA
ACACGCAATGCCCCTGCAGATCCCCGTCCACCAGATGGCGTGATATCGTCGTCGCCTAGC
GCCATCTGTTGTTCTGGAGCGGAGTTTCGACCGCC
(575 bp)

- SilkBase 1999-2023 -