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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21457_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		m7GpppX_diphosphatase_[Bombyx_mori]
Ontology
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
Transcript
Level		FPKM:28.75 TPM:12.85
ORF EntryO_BomaMSG10482_5prime_partial:A_BomaMSG_c21457_g1_i1
Sequence
(Nucleotide)
GACGTGTGCTCTTCCGATCTCGGCTGCCTAAAAGACGATGTTAGCGAGCAGCGTTGTAAA
AGGTTGAAAATTGACAATGAAAACGGCAACAATATAAATGATAATCAGTTAGAATTGAAA
GACTTTGTTTTGGAGAAAATATTGAACAATAACACTAACAGGAAAACAGCTTGTGTGGTT
GGAAAATTCAAAGACAAAAGTGGCGTGGCGCTAATCCTATTCGAAAAAAATGCTTTCAAG
GAAAATGACCTAAGTGAAGAGGGTTATTTCTCCAAAGAAACTCAGCTGAAAACGTTTTTC
GAGAACGATATTTACGGAAACTTCGAGTGTTTCCCGCCTTCAACTATAAACGGTGTGAAA
ACTACCATAATCTACCCAGCCACTGATAAGCATATTGCCAAATTTAGCCAGCAAGAAGTT
CATATTGTACTGGAGACTCCAGAGTTATATAAAGAACTGACATTGCCTCATCTAGAGAAA
GAACAGTTCAATTTGCAGTGGGTGTACAACATTCTAGAAGGTAAAAGTGAGCAAGATAGA
ATTGTACATGACAATAAAAGTGAAAAGGAAGGATTTGTGCTCCTCCCCGATCTGAAGTGG
GACGGTCTTACCAAAGAGACATTGTATTTATTGGCTATTGTCAGACAAAGAGACATAAAA
AGCCTTAGAGATTTGGACGAGCAGCATTTACCATTATTAAAGAGGATTAGAGACGAGGGA
AAGAAAACCATTTTAGAAAAATATCAGGTGCCTGGAAGTCAATTGCGTATATATCTGCAT
TACCAGCCTTCTTTCTACCATCTGCATATCCATTTCACTTATCTACGCCACGAGGCCCCT
GGAATCTATGCAGAGAAATCACATCTACTCGACACTGTCATTGACAACATTACAATGATG
CCCGACTATTATAAGAAAGCCACATTACCATTCACCATAAGAGAAATGGATAGTATTTTT
AATATATATGAAACAAACAGACAAGTCAAACGCATACAAAACGCTGATCTAATTGTTAAG
TAGATAATTTTTATAGACTAATTATTAAGTGAAAATGTTGATTGACAACGTTTTTATGGA
GCTACGCTCGCGTTTGCGTAGCTGCAACGTTTACATAACGACCGGTGTTGATTTTACTAA
AGAAAATTGCAATTTGAAAATTAGCATACAATCCGATTGCATTGTGTTAAATTGTTATAT
TGAAGATTTTGGTAGCAAACGGAGAGATAGTCTTTCTTCAATCGAGAGTTTATCAGATTC
ATATGATGAAACAGACGAAGAACTCGATGTGTCCACTTATATACCGATATCAGAATTTTG
TCATATAATTCCCAATTCAATGTCATGTTTGAGAATAGACAAAAATACAGTTTCTTTCAG
AATCTTAACCGAACCAAAGAATGGTGGAAATTTTTATACAGAATTACTAACCCCTGGAAA
ACCTGAAAATTCTGTGAAGAAACACAATCTAAAAATCAATATAAAAATCAGTGAAGAATT
AAAAATTGTTTGCTCAAACTGTTCAAATGTTTTATCTGATGGTTGTGTCAAATTCGACAG
GATTTTAGAATTGCCTTCTGCTAATTTGGACATGACAGAATGGTTCTGTCATGGACACAG
TCATGAACACGGCCATGGAAATGAGGCAGATGTAGTTATAAAACAAAATAAATTAGATTT
CCTATATCGATTAACATATTTCGTTATTGATCGATCAATCTTATCAGAGAAATCGAACAA
ATTTAATTCTAAAAGGGAGGTATACCATTGCAGCCGTTGTTTGGCTTGGCTCGGTCTCAA
AATCAAAGACACTGTCAGACTTTACAATTCTGAAGTTAAAGTACACAACAATGAAAAAGA
AGTACATATATTTTCTTACGAAAACCAACCTGAAAACATACATGTCAATGATTTTATACA
AACAATAGAAAGCATAACTGAAGATTTTAAAATTGGCTTCCAATATGCAGTGATGTGTAA
AATTGTATTAGAATGCACAATATCAGCGGCTAAAAAGCAATATCTCTTAATCTGGATAAT
GGATAAAGAATTACAAGTATTGAAGAACAAAGAAAACGTTACTAACAATAAAATTGAATT
GAAATCTAGTTTTGTTACGAAAATACTTTACAAAATTGAGTTGGCGTTGAATGATGAAGT
GGAAAATTGGTTAACGGACCCAGTTGTGGTTAATACGGAGATCTCTAAGAACATGTTCAG
TGAAGGCATCGAACATTTGCAAAAAATGGCATCGAAAGTTCCAGAATCGTTCCGTAACTC
CAACGGTTTTCATGTCAGTTACTTAAAAATTTAAACGGCATTAAATTGGGAATTCCAAAA
AAAAAAA
(2347 bp)

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