SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21347_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		TGF_beta-inducible_nuclear_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030529 C ribonucleoprotein complex
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:9.37 TPM:4.19
ORF EntryO_BomaMSG10329_complete:A_BomaMSG_c21347_g1_i2
Sequence
(Nucleotide)
TGGTGACAGCGTAAGTTCCTCCTAAGTCCGTGAGAGGTTATGTGTCAAACCACGTCAAAA
CAGTTTTGATAAAAATAATTTTGTTGTAGTTGCCGAATAAGCAACCAACATGCCGCAGAA
CGAATATATTGAGCGCCATCAAAAGCTTTACGGTAGACGGCTAGATTATGAGGAGAGAAA
ACGGAAGCGTGAAGCTCGTGAGCCTCATAAACGCGCTGAAAAGGCGCGCAAACTCCGCGG
TATCAAAGCTAAAATATTCAATAAGGAACGCCGCAATGAAAAGATTCAGATGAAAAAGAA
AATCAAAGCGCACGAAGAGAAGAATGTCAAACAGAACACAGAGAAGGTCGCCGAAGGTGC
CCTGCCTGTTTATCTACTGGACAGAGATGTTCAATCTCGGGCTAAAGTATTATCTAACAT
GATAAAACAAAAGCGTAAAGAGAAAGCTGGAAAATGGGATGTCCCCATCCCTAAAGTGAG
AGCCCAAGCGGACGCAGAAGTATTCAAAGTCCTAAAATCTGGTAAATCTAAAAGAAAAGC
TTGGAAACGCATGGTCACCAAAGTAACATTTGTAGGAGAGAACTTTACTCGTAAACCTCC
TAAATTTGAACGATTCATCAGACCTATGGCACTGAGGTTCAAGAAGGCCCATGTCACACA
TCCTGAACTAAAAGCTACTTTCTGTTTACCTATAATAGGAGTCAAGAAGAACCCAAGTTC
ACAAATGTATACAAGCTTAGGTGTCATAACTAAGGGTACAGTGATTGAAGTTAATATTTC
TGAGCTGGGTCTTGTCACGCAGGCTGGTAAAGTTGTATGGGGTAAATACGCTCAAGTCAC
GAATAATCCAGAGAATGATGGCTGCATTAATGCTGTGCTGTTGATCTAATTTATTGTTGA
GTCAAGGGAAAATCAAGATGCTTCAATTACATCTCTTGAATTGTGATAATTATACTTTTA
ATGATGAACATGTATATCGCAATACATACAATTTATATTGGTTGCAATCTTTATGG
(1016 bp)

- SilkBase 1999-2023 -