SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21344_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032452 F histone demethylase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072718 P response to cisplatin
GO:0098869 P cellular oxidant detoxification
Transcript
Level		FPKM:1.63 TPM:0.73
ORF EntryO_BomaMSG10320_5prime_partial:A_BomaMSG_c21344_g1_i2
Sequence
(Nucleotide)
AGATCGGAAGAGCGTCGTCAGGCCGGCTCCGGAAGGCGGAGAGGTTCAACCGAAGAAGAA
ACAGAAGAAGAACAAGAGTGACGCACTCGAGGATGTCATCTCCAGCATCGTCGACGAGAA
GAAAGACGAAGACGAAGATGAGAAACCGTTCGTTCTCTCGAATGTGGTTAAACGTTACGA
CAGGAGCGGACGCAGCCGCGAGGAGCTGCCCGTCAGAATTATGACCCTGACGGAATCGAA
GCTTCTCTATCCTGATGTCCCGCACGCCTGGCTCTGTGACGGCAAACTGTTACACCTCAC
TGATGCGGTGCACGCCGGCAACTATAAACCCTTCCAGGACCAGTGGAAACGTGGTCAACC
AGTTCTAGTCTCTGATGTATCTGCTCTGCTCGATAAGGATTTGTGGTCTCCTGAAAGTTT
CTCACGCGATTTCGGTGACACTCGCGTAGATCTAGTGAACTGCGCGTCCGGTCTAGTCGT
ACCCAACCAGCCCGCTAGGAAGTTCTGGGATGGATTCGATCTCGCCGTCAAGCGGCTGCG
AGACGAACGCGGCGCTCCCATGGTGCTCAAGCTCAAGGACTGGCCTCCGGGCGAAGACTT
CGCCGAGCTGCTTCCGGCGCGCTTCGACGACCTCATGAGAGCTCTCCCTCTCTCCGAGTA
CACCTCGCGCAACGGGAAACTGAACCTGGCCGCGCGCCTGCCCGAGTGCTTCGTGCGACC
CGACCTTGGACCCAAGATGTACACGGCGTACGGTGGCGCCGGCGGGAC
(768 bp)

- SilkBase 1999-2023 -