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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21344_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032452 F histone demethylase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072718 P response to cisplatin
GO:0098869 P cellular oxidant detoxification
Transcript
Level		FPKM:5.79 TPM:2.59
ORF EntryO_BomaMSG10318_5prime_partial:A_BomaMSG_c21344_g1_i1
Sequence
(Nucleotide)
CGCGCGTGCACACCCTGCGCTCCGTGTTCGGTCTGCCCGCGTGCTCGTGCGGACACGCGC
CCGCGCCCTCGCCGCAACACCGACAGCAAGCCAAGAACCTGCTGCAGATCGCGCTCAATA
AGAATGTGAAAAAGGAAGACGTCAAGGAAGAAAGTACTCCTACTAACGGTTCGTCTCCCG
TGAAATCTGAAAATGTAAAGACTGGCAGTTCCATCGTTAGCTGGCTGTCGGATTTGCCCA
TAAAGTCTGAGAGTAAAGACGAAAAGTCCGATTCTAGTACCTCGGATTCGGATGAAGGTG
GAAATTATTCGACGTTGCGAGAGTTACTGATCAGGCCGGCTCCGGAAGGCGGAGAGGTTC
AACCGAAGAAGAAACAGAAGAAGAACAAGAGTGACGCACTCGAGGATGTCATCTCCAGCA
TCGTCGACGAGAAGAAAGACGAAGACGAAGATGAGAAACCGTTCGTTCTCTCGAATGTGG
TTAAACGTTACGACAGGAGCGGACGCAGCCGCGAGGAGCTGCCCGTCAGAATTATGACCC
TGACGGAATCGAAGCTTCTCTATCCTGATGTCCCGCACGCCTGGCTCTGTGACGGCAAAC
TGTTACACCTCACTGATGCGGTGCACGCCGGCAACTATAAACCCTTCCAGGACCAGTGGA
AACGTGGTCAACCAGTTCTAGTCTCTGATGTATCTGCTCTGCTCGATAAGGATTTGTGGT
CTCCTGAAAGTTTCTCACGCGATTTCGGTGACACTCGCGTAGATCTAGTGAACTGCGCGT
CCGGTCTAGTCGTACCCAACCAGCCCGCTAGGAAGTTCTGGGATGGATTCGATCTCGCCG
TCAAGCGGCTGCGAGACGAACGCGGCGCTCCCATGGTGCTCAAGCTCAAGGACTGGCCTC
CGGGCGAAGACTTCGCCGAGCTGCTTCCGGCGCGCTTCGACGACCTCATGAGAGCTCTCC
CTCTCTCCGAGTACACCTCGCGCAACGGGAAACTGAACCTGGCCGCGCGCCTGCCCGAGT
GCTTCGTGCGACCCGACCTTGGACCCAAGATGTACACGGCGTACGGTGGCGCCGGCGGGA
C
(1081 bp)

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