SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21325_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		negative_elongation_factor_D_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:3.09 TPM:1.38
ORF EntryO_BomaMSG10287_3prime_partial:A_BomaMSG_c21325_g1_i2
Sequence
(Nucleotide)
CCTCAGAATCATAAATTTGTTGTTTGTTTAAAGCTAAGTTGAGTGCAACTTAATATAGAA
CCATGCCTAGTCAGTATGAGGAAGAACGTGTATGGGATGGTCAGAATCATAATAATCAAT
ATGAAGAAGAAGGAAATGAAGATGTTATTGAGAACCCTGAAGAGGTATTAAATGAATGTC
TGGAAAAATTTAAAACTCCAGACTACATTATGGAACCTGGTATTTTTGGTCAGCTTAAAA
GATACTTCCAAGCTGGTGGAAATCCAGAGCAAGTTATTGAACAACTGTCAATGAATTACA
ATGCTGTAGCTCAGATGGCCAACTTATTAGCTGAATGGCTTATCCTTGGAGGAGTTAAAG
TTAGTGAAGTACAAGCTATGGTTGAAAATCATTTAAAAGACATGATTCTAAAAACATTTG
ATCCCAAAAAAGCTGATACAATATTCACTGAAGAGGGAGAGACACCAGCTTGGCTTACTG
AGATGATTGAACATCCTACTTGGAGATCTTTAATTTACAGACTAGCTGAAGAATATCCAG
ATTGTCTAATGTTAAATTTTACTATAAAGCTAATTTCTGATGCTGGTTTTCAAGGTGAGA
TAACAAGCATATCAACAGCTGCACAACAAATCGAAGTATTCTCCAGAGTACTCAAATCAG
CTATTGTGGGTTTCCTTCAAAGTTCAGATGATTGGCAAAACAGTGTTAATGAATGTGCTA
AAATGGTTTGTCATGGCGCGCACACATATGTCTACAGTCAAGTTATTGTTCACATTCTCT
CACAAGAGCCAAGAGGTGGCGCTATTATGAAGAGGTTGAGCCAGGAAATAACTCGTTGTG
CTCAACAAGGCGGCCATGACGTGACCCCAATAACACTGGCCTTGACCTCTGGTGAGAGTT
GGCGCAACGCTCGGACGGCACTTGCAGCCATGCTATCGAGGGGCGCCCTCAATCCGGCTG
ATATCTCGGTGTTGTTCCGCGCTTACACGCAACCAGACTCGCCACCGGTTCATTTACTTA
GGATACCACAGTTTTTGGAACTACTCGTTGATTCATTGTTCAAATTGGGAAGCAAACTGA
ATCCGGAACACAAATCCAAATATATGTATCTTTTGGCATACGCTGCTAGCGTTTGCGAAA
GTCCGAGTCCCGGTAAA
(1157 bp)

- SilkBase 1999-2023 -