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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21310_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		poly(U)-specific_endoribonuclease-D_isoform_X1_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.66 TPM:0.29
ORF EntryO_BomaMSG10275_complete:A_BomaMSG_c21310_g1_i1
Sequence
(Nucleotide)
CCGCGATCAGTGCGGGACACACTGCTTTCTTTAAATGTGAATACCGAATTACCGTAACTG
TGAACTAGTTTGAACGTGTGAGTGAACTTTCCCGTAGTGCTGTACACTTGTAAACAATGA
AAATGAGGTTTCTTACAATGTTATGTGTTTTATTTTTTTACGTGAAGCCAAATACGGGTC
GTGAACACAATAAAAATTACAACCCTATTTTAAACACCGATTTCCTGCTTCACGAAAGCG
GCGGAATCCCCAATACACCGAAAAGAGATAATTTACCGACTAATACAAACATCGAAACGA
ATGGAACACAAACACTGGTAGCGATTCACGGTCAACTTCTGATACTGAACTGCAGACACT
GAGTGAAGAACTTCTTCGGAAAGATACAAACAATGCTGCCAAATATATCATGATGAACTT
TCAAGAAAAAACGACATCACAATCGAAAGAAGACAAAGCCCCGTTGCCGCTGCTAAATAT
ATCATCAGCGGCATGGAATATTCCAACAATAGAAAAAATTGTCCCACTCTTGGACAATTA
CGAAAGAAGCACGTTAGTAAATGAACATGTAACGCCACAGGAACGAAACGAGGAAAATGC
ATTTATGGACGCCATCATGGCCACTAGTGTTATGAGGCATTTAATGAATTTTTTGAAAGA
AAAAGGTTATGTCACACCGGATCCTAGACAACAAAGAGATTTTGTAAAGCAGCTCTGGTT
TAGCTTGTACTCGAGGGGAAAAGGAAAAATCAGTAGTTCAGGATTTGAACACATATTCGT
ATCTGAATTAAAAAATGGCGAAGTATCTGGTCTACATAATTGGATTTATTTTTCAAAGGA
AGAGGCAGCGAACCGACTGAATTACTTAGGTTACTTGAAATACAGACAATTTGGCGAGCG
TGGAGCAGTGATTAAATTCCACTTCACCCAACAAGGAGTGGACAAGCCGGTTAACTCTAT
GTTCATTGGTACATCACCTGAGTTGGAAATGGCATTGTATACTTTGTGCTTCGTAACTCG
TGCTGACAGCGAGTGTAACCTGAAACTGGCCAACAACGATGTCAGTATCATGACTCACAC
TTTCCGTTACAGGAGTAAAAATCTAATCGGTAGTGGCTATCCACAGATCTAACTTGTCAC
TGCCGCTTGCAAAATTATTGCTTATTTAGGCAACTAGATAAAGCCCATGTCATTATATTA
TAATGAAGGTAATATTTATAAGTTAATAGATATTAACCTGTATCGCGTTAGAGCCATTAA
AATGTTTTTAGGTTTTGTTATTTTTGTTTAATAAAGTTATACAAC
(1305 bp)

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