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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21281_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		polyadenylate_binding_protein_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.93 TPM:2.20
ORF EntryO_BomaMSG10221_complete:A_BomaMSG_c21281_g1_i1
Sequence
(Nucleotide)
TGACATTTCATGCAAATTGTTTAATGTTTGGATCTAACCGAATAGCTATACATTAGCATT
TTAGAATGAATCCGGTTTTAGTTTCAGAGAAGTAAAGTGATCTCGAAATATATAATTCAT
GATTTCGACGCTCGGTGGAAATGGCAGAAAATGATGATTTTTTAGACTCGATTGACAACA
ATCATTTGGATGGAACTAACGGCTCAATGAATATGACTGACAATAGTCTCGGAGGCGGAG
ATGAAGCGGCCGGAGGAGAAGCTCCTGACCTTGCAGCTATCAAGGCCCGAGTGCGGGAGA
TGGAAGAAGAAGCTGAGAAACTGAAACAAATGCAGACTGAAGTTGACAAGCAAATGAGTA
TGGGAAGCCCACCAGGACTAACCAGTCCATTAAACATGTCTATCGAAGAAAAAATAGAAG
CAGACAATAGATCAGTATATGTTGGTAATGTTGATTATGGAGCCACGGCTGAGGAGCTGG
AGCAGCACTTTCATGGTTGTGGATCTATTAACAGGGTTACAATATTATGCAATAAGTATG
ATGGCCACCCAAAAGGTTTTGCCTACATCGAATTTGGCGACAAGGATAGTGTCCAGACTG
CAATGGCTATGGATGAATCATTATTTAGAGGAAGGCAAATAAAGGTGATGCCGAAGCGTA
CGAACAAGCCGGGCCTGTCGTCTACAAACCGCCCGCCGCGCACGATGCGCGGGCGCGGGC
GCGGCTACCGCGGCGGCCTCGCGCCCTACTACACGGGCTTCCGGCCCCCGCGACGCGGCA
GGTACGTTCCCTACTGAACAACGCGCGCGCGACCGCACCCCCCCGCACACGCACACCGCG
CCCCTCTTGCAACAGACGTCATCTTGAGGTACGCGTCCATTGACCAGCGCCGGACGCACC
GCACGCAACGGATTTTATTTTGTAGTCTTTGCTCATAAATGCCGGCGTTCAGGGGTCGGC
AACCTGTTTGTCCTTAAGGGCGCAATACTAAATTTGAAAATCACCGAAGGCGCATATTTT
ACAGATAATCAACAGGTATAAATAGATCGGAAGAGCGT
(1058 bp)

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