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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21177_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		akirin_protein_[Bombyx_mori]
Ontology
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002376 P immune system process
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005719 C euchromatin
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007526 P larval somatic muscle development
GO:0016203 P muscle attachment
GO:0035060 C brahma complex
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050829 P defense response to Gram-negative bacterium
Transcript
Level		FPKM:28.19 TPM:12.60
ORF EntryO_BomaMSG10039_3prime_partial:A_BomaMSG_c21177_g1_i1
Sequence
(Nucleotide)
GAGTGATGTTGCTGCAGCCGGGTAAACGAAGGTGCAAAATAATCTTTTTAAATTTAAAAC
ATCGGACTTTACTGTAACTTGAAAACGAATTGTATATTTTTTTCGTGTATTACCTGTATG
GGGCTTAATATTATTTTTCATTTTCTTATATTCGTAATTAAAACAAATTAGTTGACATAT
ACGTAAACCAGAGGATTTCGTTGGGCGTAAAAAGAAAATGGCGTGTGCTACATTAAAAAG
AAATCTGGATTGGGAGTCTAAGGCGCAATTACCTACAAAGAGAAGAAGATGTTCACCATT
TGCAGCAAGTCCAAGCACAAGTCCTGGGTTAAAAACATCAGAATCGAAACCATCTTCATT
TGGAGAATCCGTTAGTGCACCTGTGAAAATTACCCCAGAACGCATGGCACAAGAGATTTA
TGATGAGATTAAACGACTGCATAGACGTGGACAGCTGCGCCTGGCCAACGGCTCTGCTGC
ATCATGCTCATCATCAAGTGGATCCGAAGGAGACTGTTCACCGCCTCATCAATCAGCTCA
CGGCCCACAACGTGCCCGCACTCGTGCACTATTCACTTTTAAACAGGTTCGTATGATCTG
TGAGCGAATGCTCCATGATCAGGAGGTGGCTCTACGTGCTGAGTATGAGTCTGTACTCAG
CACCAAGCTTGCTGAACAGTATGAAGCCTTTGTGAGGTTCAACCTGGATCAGGTGCAGCG
CCGACCCCCGCCCAGCACGTGCATGTCGCTCGGTATGGACGCCGAACACATGCACCAGGA
CCTTGTACCCAGCTATCTGTCCTAATAACAACATGAGGCGGAAACGTAGTGTGGCGCCGC
CAATATATCAAGACAAACATATTTTCGTATATGTGAATAATGTATGCGGGAGAATAAGTA
TCCTAACAAATGAAGACATTGTGATTGCGGCGGAGTTCGACTGGGACTTGTATTGATTGA
TGCACTATAGTAAAAAAATGTAATACAAAAGACCAACTACAGAATTTTCATCAAATTGAC
AGAAATTTGTCATGTTACAAACTTTACTTAGTGTATAAAATTTTATTATACACATTAACT
GTTGAAATGTACATTACATTTTATTCAAAGTCTGTACCACTAAAAGTGTAAAAAGAAGTT
TAATGCATTCTCTGCAATGTTGCAAGTTAAATTATTCTTAAGAATAAGATAAATTTGTAT
AAATACAGAGATGATATTAAGAGTAAGCAGTTTGTTTGCGTGCATTGTTAACACAATATT
TTGTCCTGGTTGAATTCCGTGGTTCATGCCACATAAACATAATTAGCTTATAACGCTTTA
GATAAGGTTCGCTGGATAATTGTGTTCATAGACTGGGACGATGGCGACTGCGTTCGCTAT
AAAGTATTGATTTAAACGTATGCCACGCATTTGAATTGAAAATTGTACTGAGATGTTATT
AATGTTTAAAAAAAAAAACTGGTCTTTTGTTAACAATATGGCCAAAGTTAGGGTCATTGT
TGTATATGTCATAGTAATTTGACAAGTAGGATTTGAATTTTCGAATCAAAAATATATACA
AACGTTTTATATTTACGTTTTCTAAACAAACGGACCTGTAGTTTAGTATATAATAACATG
ATAAATTCACGCAGAGTGCCTCTTTAAATCATTGTCCTCAAGAGTTTGTGAATTAGTTAG
CCATAATTATTTTGAATGGTATGATTTACTTTTTTATTGTATTTTAATGTTGTCGAATTA
TAGTTATAGTTTTTTTTTTCGTCGTTGCTAGTAGTTGCAAATGCGACAAGCTTCGACGGA
ATGGCCTTCGTATCAGACGTCTGGTAATTTGTAATCTAATGTATTTGTAAAATGGTCATG
GCCGAAATTTATCACTCATTTTTTGTGTTTTATTCACACTGATACACGGCTTACTAGAAA
ATTAATAATTAATTAGCTTTATTTAAGACTTTCTAAGTTATTTTTTTGCTCTCAATAATG
CACAGTTTTAGCTAATGTCGCCGCCGCACACGGATACTGCGCGACACATTGACAAACATT
ATTGGGATTTGTTTTATATTATTGTTTAGTTAAAAAAAAAAACATTTTGATTGAATACGA
AAACGATGATTTGTTACCAAGCATTATTCAATGAAAATAGGATAGGATTTTTTTAAATTG
TATTATCAGCTCATTATTAGTAGGTTATTGGCGTTTAAGAACTGAAATTAAATTAGCTAA
ACACCCAAAAAAAAAAAGATC
(2241 bp)

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