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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21176_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		histone_deacetylase_3_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0017053 C transcription repressor complex
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070491 F DNA-binding transcription factor binding
GO:0070932 P histone H3 deacetylation
Transcript
Level		FPKM:5.40 TPM:2.41
ORF EntryO_BomaMSG10037_5prime_partial:A_BomaMSG_c21176_g1_i1
Sequence
(Nucleotide)
GAAATTTGAACCTTCTGGATTTTGCTACGTCAATGATATAGTAATAGCAATTTTAGAGCT
CCTAAAATATCATCCAAGGGTTCTGTACATAGATATTGATGTTCACCACGGAGATGGCGT
TCAAGAAGCTTTTTACCTCACTGACCGAGTCATGACGGTTAGCTTCCACAAGTATGGGAA
CTATTTCTTCCCTGGAACGGGAGATATGTATGAAATTGGTGCAGAGAGTGGACGATATTA
TTCAGTAAATGTACCACTGAAAGAAGGCATAGATGATCAAAGCTACATACAGGTATTTAA
ACCAGTGATCTCCTATGTGATGGAGTGGTATCAACCAACAGCGATAGTACTACAGTGCGG
TGCTGACTCGCTGGCTGGCGATAGGCTTGGTTGCTTCTCACTCTCAACTAGAGGTCATGG
CGAGTGTGTGAATTTTGTTAAAAACTTAAATGTGCCAACCCTGGTGGTGGGCGGAGGAGG
ATATACCTTGAGAAATGTAGCTCGCTGCTGGACATACGAAACCTCACTTCTTGTGGACGA
ACAGATCTCCAACGAGCTTCCATATAATGAGTACTTAGAGTTCTTTGCACCAGATCTTCA
GTTGCATCCAGAGATCAGCAGGCCTGAAAGCACAAACAATGCCAATAGCAAAGCTTATTT
AGAAGCTATAACCAAATATGTATGCGATAATCTGAAGATGTGTCAACATTCGCCCGCAGT
ACAAATGACTCACATACCAGGTGACTTCTTCCCTGAAGATTACCGAATCAAGGACGAACC
CGATCCTGACGTTCGTATCAGTCAGGACGATGCTGACAAAATGGTGGAGCCCAAAAACGA
GTTTTACGAAGATGAGAAAGATAACGATAAGGAGTTGCCACCAGAGATTAAGGATCCATA
GCAAATAGAA
(910 bp)

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