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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21159_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		mago_nashi_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0000335 P negative regulation of transposition, DNA-mediated
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007267 P cell-cell signaling
GO:0007275 P multicellular organism development
GO:0007309 P oocyte axis specification
GO:0007315 P pole plasm assembly
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007318 P pole plasm protein localization
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008104 P protein localization
GO:0008380 P RNA splicing
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0035145 C exon-exon junction complex
GO:0045451 P pole plasm oskar mRNA localization
GO:0045495 C pole plasm
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046594 P maintenance of pole plasm mRNA location
GO:0048477 P oogenesis
GO:0051028 P mRNA transport
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:16.27 TPM:7.27
ORF EntryO_BomaMSG10013_complete:A_BomaMSG_c21159_g1_i2
Sequence
(Nucleotide)
TCTACATTGAATTAAACACGCGAGTGTAATCTGAAGTTTAATTCTGAAATTAATTTAACT
GATAATTTGCGTTTGAGGGTTTTCTCATCATTGAGTAATTTTCTTTTAGTGTATCAGTAT
AGCCGCTAAAGTGGAAGTTCTCGAGGATAAATTTAAAACTCTGTGCAAAATGTCTACGGA
TTTTTACATACGATATTATGTTGGACACAAGGGAAAGTTTGGCCACGAATTTCTCGAATT
TGAATTCCGGCCTGACGGGAAACTGCGTTATGCCAATAATTCCAACTATAAAAACGATAC
AATGATACGTAAAGAAGCCTATGTTCACCCTTGTGTAATGGACGAATTAAAAAGAATCAT
AATTGATTCCGAAATCATGCATGAAGATGATCGCCTGTGGCCACAACCTGATAGGGTTGG
TAGGCAGGAATTAGAAATTGTTATTGGAGAAGAGCATATTTCTTTCACTACTTCTAAGAC
TGGATCTTTGGTTGACGTGAATCAATCCCGCGACCCTGAGGGTCTTCGTGGGTTTTATTA
TTTAGTTCAAGACCTTAAATGTCTAGTATTCTCTTTAATTGGGCTACATTTCAAGATTAA
GCCTATATAAAAATTATAATCTCCTATTCTTGAGTAATA
(639 bp)

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