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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c21155_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		pentatricopeptide_repeat-containing_protein_1,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0042780 P tRNA 3'-end processing
Transcript
Level		FPKM:3.90 TPM:1.74
ORF EntryO_BomaMSG10009_3prime_partial:A_BomaMSG_c21155_g1_i2
Sequence
(Nucleotide)
TTGAAGACTGAAGAAGATTAAGCTAATAAATAATATTTCTAAGATATGTACTTTATTGTA
CCTACATAAAACAGAATCTGAAGGTCTTTGAAATTTCTCACACATTAAATTAAATATTTT
GTAATCAACAATTCAAAATGGCATGTACTAATCTCCTGAGAAATATTAAAACCATACATT
TTATTCGACGTAGCTTTTTCTCAACTTCGATTATACAAAATAATCAATCTAAATATTCCA
AACATACAGAATTCCGAACAGAACACAATCAATTGGTGTATTTAGATGATCCTGATAAGT
TTGGGACATTGTCCGGTTTCAAAATACAGGACGAAAAACTTGTAGATGCTGGAGATATAA
AAGAAGAAGAATATACACAAAATAAACCCTTACCTGGTAAAAAATTAACCATTAGACAAT
ATGCTGATTTAATTAAACAATACATAAAGCATAAAAGATTAAAAGAAGCTATTGATGTAT
TGGAGGTGAGAATGCTACAGGAAGATAAAGTGAAACCGGAAAATTATATATTCAACATAT
TAATTGGTGCGTGTGCTGATGTAGGTTACACAAAAAAAGCATTTCGTTTGTTCAATGAAA
TGAAAGCACGAGGACTAAAACCTACAGGTGATACTTATACCTGTTTGTTTCATGCATGTA
GCAAAAGTCCATGGGCATCGGATGGTTTAAAAAATGCTAAACATCTTCGAGAACATATGA
TTTTAAAAGGAATAGAACCAAATCTGACAAATTATAATGCAATGATAAAGGCATTTGGAT
GTTGTGGTGATTTGGTTACGGCTTTCAGAACAGTTGATGAAATGGTAACTAAGAAAATAA
AAATTAGAGTTCATACTTTTAACCATCTGCTACAAGCTTGTATATCAGATAAAAATAATG
GACTGAGGCATGCTCTGATTGTATGGAGAAAAATGTTGAATGTTAGAGAGAAACCTAATA
TTTACTCTTTCAATTTAATGCTTAAATGTGTGAAAGACTGTAATTTGGGAACTAAAGAGG
ACATTGAAGAATTAGTTGGTGCTGTCAAAGGACAAACATTAAAAGGAAGCCAAAATGCCA
TGCTAGAGACGCAAAATATTGACTCGCAAGAGTTAAAATTATTGCAAGAACCTAAAAGTC
CTCCTGAAAAAATTAGAAAAGACCAAATTGATTCTCAAAAAAGTATTAATGGTAGTAACA
AAATGAATATGCAAAATTCAGATGCAGTAGAAACAACAGATTTAATGATTACAGAAAACA
AAGAAAATGTAACAATACAATTAGTAGATAATTTAAAAAATACCAGCAAAGAACAAAGAA
ATGTACCTAATTTATTGTCAAAGGAAATTAATATGCACCATATATTAGCTTTACAAGAAG
TGCATTCATTACAAGATAAGTTTACTGTAATAGGTGGACAAGAAGATTTCCTTGAAGAAA
TGAGTGCTTATTCAGTTAAACCAGACATTAAAACGTTTACACAAATGCTCCCATTATTGG
ATAATACAACAGAGGCTGAAAATAAACTACTTCATACTATGCACAATATGAAGATACGAG
CAGATATTGACTTCTACAACATGTTAATAAAGAAAAGGTGTTTAAGGCTGGATTATGATG
CTGCTAACGCTGTTAAAAAGATAATAAAAAAGGAAAGTGAAATTCGGAAACGTTTGTATC
CAGATAATAAAAAGAAGAGACTAAATCTTAATATAATGTCTTATGGCGTCTTGGCAATGG
CTTGTAAAACTAAAGAAGATGCAGAAATCCTCCTAGCTGATATGAGACAAGAACAACTTA
AGGTGAATATAGAAATTCTTGGAGCTCTATTGAAACATGGCATCGTAAATCATCGATTCG
ACTACGTTCTGTACGTATTGAATATTGTAAAAGACGAAAAGGTTCCTGTTA
(1911 bp)

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