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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c14232_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		dsp_protein_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006338 P chromatin remodeling
GO:0007379 P segment specification
GO:0008134 F transcription factor binding
GO:0008301 F DNA binding, bending
GO:0008348 P negative regulation of antimicrobial humoral response
GO:0017025 F TBP-class protein binding
GO:0017055 P negative regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0032502 P developmental process
GO:0035218 P leg disc development
GO:0043388 P positive regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:28.61 TPM:12.79
ORF EntryO_BomaMSG3948_5prime_partial:A_BomaMSG_c14232_g1_i1
Sequence
(Nucleotide)
CGAATACTCTGCGTAACAATAAGCGCTGAAATCGTGTGCTCGTTTGTATTGAGAATTTTA
GTTGTCGCAGAATCAGTCAAATCAAGAAAGCGATCAAAACAATCAACAAGCGAACGGTAT
TCAACAGAGTCATCAGTCGATCCAACAACAACAGCAGCAGGAGCAAAATCAAACTATTCA
ACAGCAACAAAGTCAATTACAACAGCAGTTGCAGCAACAACAGAATCTCCAGCAAGCTTT
GCAACAGCAGAACCAATCTTTGCAGCAGTCATTACAACAACAACAACAGCAGCAGCAAGA
AGAGCAGCAACCAACCCTGCAGCAGATGCTACAGCAGCATCAACAACAACAGCAGCACCA
AGGCTTACAACAAACTTTGCAGCAGACATTGCAAGTTAGTCAGGCTCAAGCCCAAGCAAT
AGCACAAGCTCAAGCAGCCTTACAGCACCAAGTTGCTCAATCAATACAGCAGCAACAACA
AACTCTACAAGAACACATTCAAGCTGTTCAGCAACAACAAATACAGGCAGCACTACAGAG
GCAATCTGCCACTCTACAGGAGCTGCAGCAACAGGCACAGCAGCAAGCTTTACAGCAAGC
GACAGTAAATAAGGCCAGGATGCCCCGTTCAAGGCCATACAACAAGCCCCGCGGTCGCAT
GACAGCTTATGCATTCTTTGTGCAGACGTGCCGAGAAGAACACAAGAAGAAATACCCTGA
TGTCAGTGTTATATTTGCAGCATTCTCGAAAAAGTGTGCAGAGAGGTGGAATACAATGTC
GGAAAAAGAAAAACAGCGGTTCCATGAGATGGCTGAACAGGACAAGCATCGATTCGACTT
GGAGATGCAGAACTATGTACCACCAAAGGACATGAAGGTCAGAGGGCGAAAGAGGCAGCA
GATGAAAGACCCTAATGCACCAAAGCGCTCGCTATCAGCATTCTTTCTGTTTTGCAATGA
TGAACGTTCGAAGGTGAAAGCTGGCAACCCAGAGTACACCATGGGCGACATTGCGAAGGA
ACTCGGCAGACGTTGGGCGGCCGCTGATCCGGAAACTAAGGCTAAATATGACGCGCTATC
TGAAAAAGACAAGGCGCGATATGATAGGGAAATGACAGCGTACAAGAAAGGTCCGTTAGC
TCAGCCGCCGCCACAGCCGCCTGTCGTCCCCGCCATCGAGGACGAGGGCGGAGACTTCGA
TGCAGACGAAGAATACAATTGAAATAATGTGATCGCTGTCGATACAGCCTAAAATCAGGA
CAGAGAGATTTAACTCGATTTTGAAGATGAAAGTGCGCGACAGTCTTTCCCCCTTTTTTC
CAGCCAAATGTATAACGCAATTGCTGTATACATTACTGATTTGTTTTGTTCATTATTCAG
GGGATGATTTATTTTTGTGCTGCGGGTTTGGGGAGCACTAGTTGATTGATTTTAATAGAA
ATTGTACTCTTGTTTTGTTAGGGGGGGTCGTCGTCGCCATTCAAGGAAGGGTCGTAAATT
TAAGAAGCGTTTTGACGTACGATCAGGTGTCAGAGAGGCTGGGTCTTTGAACGAAAGATT
GAGGAGTGAATCTTCTGTTCTGTAGCGTGTTATAGTTTTAACAAATTTAACTCTGATTCA
CAGATTTTACTTATACTTTCAAATACTCAAAATATTTTTGTACGATTTTTTGTTTGTCAT
CTGAGAAATGAGGTGTCAAAGAGTTTTATTTACAGCTTAAAAAAAACGGCCAAACACCTG
GGTCGTTTTAAAAAAAAAAACCTCTAATTTTATGTATTCTTCAACAAATAAATGATTATC
TTTAGTTCTCAGATGACGAATGTTGAACAGATTTTGAATGACAAAAATTTTAACATGAAA
TGACTTTTAATTGTTGCAAACTTTTGTAAACGAAACTGACGTTATTTTATGATCTTACGT
TGACTGACAATGAAGAAGCGAACAGTTGATTTTTTTATTTTTCTTGATACGAATTTCTTC
GAGATACAAGGAAAAAAGTAGACAATATGACAATTGGCAGTTAATAAAAATTGTCATTCT
CCCGCCAAAATATCGTACCATGAAAGTAAAATCAAAAAGTGTCATGGCGCCCAAAACATT
GTCTTGCGTCTACTTATGTCAGCGGACACTGAAGGTCGGAAATGGTGTGGCCCTGTGATT
TAATAAAATCGTAATTCAAGCAATATGTTATCAGGAACAAATCGATACAGACGTTTTCAG
TATCACGTATAATGTAAGTCAAAAAGTATTTCTTATTAAGTTAGCATAGTAAGGAGGTCG
GGAGAGATCGGAAGAGCGTCGT
(2302 bp)

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