SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c13696_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		putative_RNA_polymerase_II_subunit_B1_CTD_phosphatase_RPAP2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0009301 P snRNA transcription
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:3.47 TPM:1.55
ORF EntryO_BomaMSG3781_internal:A_BomaMSG_c13696_g1_i2
Sequence
(Nucleotide)
GTGCTCTTCCGATCTTTAATATGCTTGAATTAGAAGACAAACGTTATGATGCCAAAACAA
TGCAAAGGGAAATGAAACCGCTGCCAGATTACACTATGCTACAGGAAGAAAGCAAGAAAA
TACAATTGAAAGTAAAGGCTTTTTTTGCTGGTCAAACTGAAATACCTGAACCAGAGCCTG
AAGAAAAGAACACACAATCAGATGAGAACTTCACAGCTTTGCCATTAGTAGACAAGAATT
CTCAAAATGCATTACGTAGACGAATAGTCTGTCAACATTTAAATAAGACCCTACCAGACA
TCTTGAGGTGCCTAGGTTTATTAAGTTTGGCCATAAGCACGGAGGTGCGTCTTTTGGTAA
ACACATTCAAATTGAAAGCAAATAATATAATGTTTAAGCCGATACAGTGGACTATGATTA
CCATAATATTCATAAAACTTCTATCATTAAGAGATGTACACTTGGCACACTTATTGGAGC
AACCAATGGCAT
(492 bp)

- SilkBase 1999-2023 -