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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c13529_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_mitochondrial_isoform_X2_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016597 F amino acid binding
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0019233 P sensory perception of pain
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.92 TPM:0.86
ORF EntryO_BomaMSG3685_3prime_partial:A_BomaMSG_c13529_g1_i1
Sequence
(Nucleotide)
CTAGGTCATTGAAAGTTGGAGTATACAATTTCTAATTAAACCAATGTTTATCCCACATTA
AAGATGTTACGTGTACCGGTTAAAAAAAGCACAGGTTTCACACGAATGAAGTCTTCCAGT
AGTATTCGAAATACGTTTATAAAATATTTCATCGATAATCATGCCCATAAATACGTGAAA
TCAAGTTCAGTTGTACCGTTATGTGATCCGACAGTTCCATTTGTAAATGCGGGAATGAAC
CAGTTCAAAGGTGTATTCCTTGGCACAGTTAATGCACCATGTCCGAGAGCTGTAAATTCA
CAGAAGTGCATAAGGGTTGGTGGCAAGCACAATGACTTGGATTTAGTTGGAACTGATAGT
CATCATCACACATTCTTTGAGATGTTGGGCAATTGGTCCTTTGGTGACTACTATAAGAAA
GAGGCATGTCAAATGGCGTGGGATCTGCTGCTCGGTCCCTATCGCTTGAAGCCTGATGAT
TTGGTTGTCACATACTTTGCCGGTGATCCTACCATGAAATTAAATGAGGATAGAGA
(536 bp)

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