SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c13463_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		RNA-binding_protein_Nova-2_isoform_X7_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0021510 P spinal cord development
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0050684 P regulation of mRNA processing
GO:0051252 P regulation of RNA metabolic process
Transcript
Level		FPKM:1.87 TPM:0.84
ORF EntryO_BomaMSG3656_3prime_partial:A_BomaMSG_c13463_g1_i1
Sequence
(Nucleotide)
CGCGGAGGTTGCATTCGAGGCGCTTCGCCCCCCAGCCGTGGCGCCCATCTCGCTGCAAGG
CGGCGTGCCGTTCCCGTCGGCCTCGCTGCTGCCGCTGTCCAAGAGCCCCACGCCGGCCGA
CGCGCAGCCCAAGGACTCTAAGAACGTCGAGATAGCGGAGGTCATCGTCGGCGCCATCCT
CGGGCCGGGAGGGCGCAGCCTGGTGGAGATACAGCAGATGTCCGGGGCCAACATCCAGAT
CTCGAAGAAGGGTACGTTCGCTCCCGGCACTCGGAACCGCATCGTCACCATCTCCGGCTC
GCAGACGGCCATCAGCAACGCTCACTACCTCATCGAGCAGAAGATCCAGGAGGAGGAGCT
GAAGCGGACCAGGCACAACGCCATCTCGACCCTCATGCAGTAACTACGCTCCCTCGCCCT
CGCCCCTCGGCACCGCGCCACGCGCAAGTAGCGCCGCGGGGGGGGGCGCCCGCTTGTCCG
GCTGCTCACTCTCAAATGAATATTAACATCCACTTACACCCTAACAACATGACGCATCTA
ATTCGTAAATCGCAACGCTAAGTAAAAATAGCAGTCAAAAAACGTTTTGTATAAACTTGA
ACGTGGACTCTGGGATTGCGACGTGATGATTTTCCCAGTGTGCGTTACTGTCGTACTCCA
TATCGACGGAAGAAAGCGAAAATGTCGTATCTTGAAAAACCCAACTGTATATATATATAT
ATATATACCAAAGCCATAAATTGATGTATTTAAATTAACATAATCAGATACCACTATACA
CAGACAGGC
(789 bp)

- SilkBase 1999-2023 -