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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c13036_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		RNA_pseudouridylate_synthase_domain-containing_protein_2_isoform_X4_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.40 TPM:1.52
ORF EntryO_BomaMSG3484_internal:A_BomaMSG_c13036_g1_i1
Sequence
(Nucleotide)
GTTCCTGCCATGGACGATGGGAATGCAGAAGTTTGCGGTAGCGTTGCCAATGGGCGGCAT
GGTGCCATTGGTGCCTCCGCTCTTGGCAGCGTTACCGCCCGCACCGCCCCCTCTTCGGCT
TATAGCCCCACCGCAGATTCAACATCAGGCACAACCAGGCAGAAAGGGAGAAAAAGACAA
CGGCAAGAACATAATCTTATCTTGCGAGAAGAGGAAAGCAGATGACAGCGAAATCAACAA
AGACTTAAAAAAGGCTAAATTAGAAACGAAGGCTTTAAAAGCAAAGAGGCCCGGCTTCAC
GGACGACAGATACAACGAGACATCTTATTACATGGAAAACGGTCTTAGAAAAGTCTACCC
GTACTATTTCACGTTCACGACCTTCACGAAAGGGAGATGGGTCGGGGAGAAGATCCTGGA
TGTCTTCGCGAGAGAGTTCAGGGCGCACCCTGCAGCGGAGTACGAAAGGTGCATCAGGGC
CGGTACCCTCACGGTCAACTACGAGAGGGTCGACCCTGATTACAGACTCAAACACAACGA
CCTTCTAGCCAACGTAGTGCACAGGCACGAAGTACCGGTCACCAGCCAACCCATCACCCT
CGTTCATATCGACGAGGACATTGTGGTTGTCAACAAACCGGCCTCTATCCCCGTGCATCC
GTGCGGTCGCTACAGACACAATACCGTTGTTTTTATCCTCGCGAAGGAATACAACTTGAA
GAACCTGAGGACCATCCACAGACTGGACAGGCTCACGTCAGGACTTCTTCTGTTCGGGAG
GAGTCCGAAGAAAGCTAGACAGATGGAGCAGATCGGAAGAGCGT
(824 bp)

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